KEGG T05072: BKK79

Cupriavidus sp. USMAA2-4: BKK79_07265

Entry

BKK79_07265       CDS       T05072

Name

(GenBank) exodeoxyribonuclease VII large subunit

K03601

exodeoxyribonuclease VII large subunit [EC:3.1.11.6]

Organism

cuu Cupriavidus sp. USMAA2-4

Pathway

cuu03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:cuu00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    BKK79_07265
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cuu03400]
    BKK79_07265
Enzymes [BR:cuu01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     BKK79_07265
DNA repair and recombination proteins [BR:cuu03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     BKK79_07265

SSDB

Motif

Pfam:

Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon BLH_phosphatase DUF4455 Hex_IIIa

Other DBs

NCBI-ProteinID:

AOY91622

UniProt:

A0A1D9GVL0

Position

1:complement(1661388..1662773)

AA seq 461 aa
MTDFQNFQRETRSPAPAGGREVIPVGELNHAIASLLERSFPLAWVRGEISNFTRAASGHW
YFSLKDARAQIRCVMFRGRNQHVDFAPREGEAVEVRALVSMYEARGEVQLNVEAMRRAGV
GNLYEAFLRLKEKLAAQGLFDPARKRELPAHPRTIGVVTSLQAAALRDVLTTLRRRAPHV
PVVVYPVPVQGAGAAEKIAAMLELAGRRAECDVLILCRGGGSIEDLWSFNEEVVARAVAA
SPVPVVSGVGHETDFTIADFVADVRAPTPTAAAELVSPDRAQLLRQAARERERLVRAMRA
AMDRRAQHLDWQARRLRSPQAQLQEHRARVDNLARHLRAALQSGLVARRHRQQLLGMRWA
AARPDVAPARAELGRLALRLQAAAARGQERAAQRLHRAAGALELLAPQRTLERGYAVLLD
ARGKALRAPSELRAGSVVEAHLAEGVADLAIASVQPKLSDF

NT seq 1386 nt +upstreamnt +downstreamnt
atgaccgatttccagaacttccagcgtgaaacgcgatctcccgcaccggccggcggacgc
gaggtgatcccggtcggggagctcaaccatgccatcgcctcgctgctggaacgcagcttt
cccctggcctgggtgcgcggcgaaatctccaacttcacgcgggccgcgagcggccactgg
tatttctcgctgaaggatgcacgcgcgcagatccgctgcgttatgttccgcggccgcaac
cagcatgtcgatttcgctccgcgcgagggcgaggcggtcgaagtgcgggccctggtctcg
atgtacgaggcgcgtggcgaggtccagctcaatgtggaggcgatgcgccgcgccggcgtc
ggcaacctgtacgaggcgttcctgcgcctgaaggaaaagctggcggcgcaaggactgttc
gatcccgcgcgcaagcgcgaactgcccgcccacccgcgcaccatcggcgtggtcacttcg
ctgcaggcggcggcgctgcgcgacgtgctgaccacgctgcgccggcgtgcgccgcacgtg
ccggtggtggtctacccggtgccggtgcagggcgcgggagcggccgagaagatcgccgcc
atgctcgaactggccggccgccgggccgagtgcgacgtgctgatcctgtgccgtggcggc
ggcagcatcgaagacctgtggtctttcaacgaagaggtggtggcgcgcgcggtggcggcc
agcccggtgccggtggtatcgggcgtggggcacgagaccgacttcaccattgccgacttc
gtcgccgacgtgcgcgcgccgacgccgaccgccgcggccgagctggtgagtccggaccgc
gcccagctgctgcggcaggccgcgcgcgagcgcgagcgcctcgtgcgcgccatgcgcgcg
gccatggaccgccgtgcccagcacctcgactggcaggcgcgccgcctgcgcagcccgcag
gcgcaactgcaggaacaccgcgcccgcgtcgacaacctggcgcgccacctgcgggccgcc
ctgcagagcgggctggtcgcgcgccgccaccgccagcagctgctcggcatgcgctgggcg
gcggcccgtcccgacgtggcgccggcgcgcgccgagctcggccgcctcgcgctgcgcctg
caggccgccgccgcgcgcgggcaggagcgggccgcgcagcgcctgcaccgcgccgccggc
gcgcttgagctgctggcgccgcagcgcacgctcgagcgcggctatgcagtgctgctcgat
gcgcgcggcaaggccttgcgcgcaccctccgaattgcgcgccggcagcgtggtggaggcc
cacctggcggagggcgtggccgatctcgccatcgccagcgtgcagcccaagctgtccgac
ttctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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