KEGG T06758: CUP3940

Campylobacter upsaliensis: CUP3940_1239

Entry

CUP3940_1239      CDS       T06758

Symbol

valS

Name

(GenBank) valyl-tRNA synthetase

K01873

valyl-tRNA synthetase [EC:6.1.1.9]

Organism

cux Campylobacter upsaliensis

Pathway

cux00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:cux00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CUP3940_1239 (valS)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cux01007]
    CUP3940_1239 (valS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cux03016]
    CUP3940_1239 (valS)
Enzymes [BR:cux01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     CUP3940_1239 (valS)
Amino acid related enzymes [BR:cux01007]
Aminoacyl-tRNA synthetase
  Class I (U)
   CUP3940_1239 (valS)
Transfer RNA biogenesis [BR:cux03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CUP3940_1239 (valS)
Prokaryotic type
    CUP3940_1239 (valS)

SSDB

Motif

Pfam:

tRNA-synt_1 Anticodon_1 tRNA-synt_1g Val_tRNA-synt_C tRNA-synt_1e tRNA-synt_1_2 tRNA-synt_1f DUF3375 tRNA-synt_1b DUF1664

Other DBs

NCBI-ProteinID:

QKF88183

Position

1234363..1236975

AA seq 870 aa
MYDKNLEKKYYELCEKRGYFEIDSNKSIQKEGKNFCIMMPPPNVTGVLHIGHALTFTLQD
IITRYKRMDGYKTLYQPGLDHAGIATQNVVEKQLLAQGITKEELGREKFIEKVWEWKEQS
GGKILEQMRTLGITPAWSRLRFTMDDGLANAVKKAFVKLYDEKLIVRGNYMINWCTHDGA
LSDIEVEYKENKGKLYHIKYFLKDSEEFLVVATTRPETFFGDTAVMVHPDDERYAKFVGK
EVVLPLSKKAIKIIADESVEKDFGTGVVKVTPAHDMNDYEVGLRHHLEFLSVFDEKGILN
EHCLEFMGLERLEAREKIVQKLENLGFIEKIEEHHNQVGYCYRCNNIVEPYISKQWFVKK
EIAQKSIEKVALNKTQFYPSHWVNSFNAWMRDLRDWCISRQLWWGHQIPVYYCECGCEWA
SEDTPKSCPKCGSTNFHQDPDVLDTWFSSGLWAMSTLGWGNKDWGKDQFWFEKDLREFYP
NSLLITGFDILFFWVARMMFQSTNALEELPFKHIYLHALVKDEQGRKMSKSLGNVIDPNE
SIKTYSADILRFTLALLAVQGRDIKLSEDKLLQVRNFTNKIYNATNYLLLNENKFEDLEN
ITIQSELAKFIDAKFQECLKQVRENLENYRFNDAANYLYRFFWDDFCDWGIELSKAQKSS
VKELGSIFKEALKALHPFMPFISEYTYHKLSGSELENSASIMISAYPNLGNKDEKIERIF
SLLIESIISIRRAKSLIELGNAKIEKAYIKLNNSAMQSEIEKYQHFITLLAKCENIEFIS
EKLNNAICDVSENLEINIKLDNIDLSAIIARLENQKAKLEKEIAKINAMLSNEKFLSKAP
KDIILQNQNALNNLKEQFEKVQMELKNLKG

NT seq 2613 nt +upstreamnt +downstreamnt
atgtatgataaaaatttagaaaaaaaatactatgagctttgtgaaaaacgcggatatttt
gagatagattcaaacaaaagcatacaaaaagagggtaaaaatttctgcattatgatgcct
ccacctaatgtaacaggcgttttgcacattgggcatgctcttacttttaccctgcaagat
attatcacgcgttataaaagaatggacggctacaaaacgctttatcagcccggactagac
cacgcaggtatcgctacacaaaatgtcgtagaaaagcaacttttggcacaaggcattaca
aaagaagagcttggaagagaaaaatttatagaaaaagtgtgggaatggaaggagcaaagt
gggggcaaaattttagaacaaatgcggacacttggtataactccagcgtggagtcgtttg
cgttttactatggatgatggcttggcaaatgccgttaaaaaagcctttgtaaagctttat
gatgaaaagcttatcgttcgaggcaattatatgatcaattggtgcactcacgatggtgct
ttaagcgatatagaagtcgaatataaagaaaacaaaggcaaactttatcacattaaatat
tttttaaaagatagtgaagaatttcttgtcgttgctacaactcgtcctgaaacttttttc
ggcgatacggcagtaatggtgcatcctgatgatgaaagatatgctaaatttgtaggaaaa
gaggtcgttttgcctctaagcaaaaaagcgatcaaaattatcgctgatgaatctgtggaa
aaagactttggaacaggtgtagtaaaggtaactccagcacacgatatgaatgattatgaa
gtgggcttaagacaccatttagaatttcttagcgtttttgacgaaaaaggaattttaaat
gagcattgtttggaatttatgggtttagaaagacttgaagcgagagaaaaaatagtccaa
aaactcgaaaatttaggttttatcgaaaagatagaagagcatcataatcaagtgggctat
tgctatcgttgcaataatattgtagagccttatatctctaaacaatggtttgtcaaaaaa
gaaattgctcaaaaaagcatagaaaaagtcgccttaaataagacacaattttaccctagc
cactgggtcaatagctttaatgcttggatgcgagatttgcgtgattggtgcatttcaagg
cagctttggtggggacatcaaattcctgtttattactgcgagtgtggatgtgagtgggca
agtgaagatacacccaaatcttgcccaaaatgtggcagcactaattttcatcaagaccct
gatgtcttagatacttggtttagctcgggtctttgggctatgagcacacttggctggggt
aataaggactggggcaaggatcaattttggtttgaaaaagatttgagggaattttacccc
aattccttgcttattactggttttgacattttatttttctgggtcgctagaatgatgttt
caaagcacaaacgccctagaagaacttccttttaagcatatttatttacacgctttagtc
aaagacgagcaaggacgcaaaatgagcaaaagtcttggtaatgtcattgacccaaatgaa
agcattaaaacttatagtgctgatattttgcgttttactcttgctttgttagcggtgcaa
ggacgcgatataaaattaagcgaagataagcttttgcaagtaaggaattttacaaacaaa
atttacaatgcgacaaattatcttcttttaaacgaaaacaaatttgaagatttagaaaac
attactattcaaagtgagcttgctaaatttattgacgcaaagtttcaagaatgcctcaaa
caagtaagagaaaatttagaaaactaccgctttaatgatgcggcaaattatctttacaga
tttttttgggacgatttttgtgattgggggatcgagcttagtaaggcgcaaaaaagtagt
gttaaggagcttggaagcatttttaaagaagccttaaaagccttacatccttttatgcct
tttataagtgaatatacctaccataaattaagtggaagtgagcttgaaaatagcgcttcg
attatgataagtgcttatccaaatttgggtaacaaagatgaaaaaatagaacgcattttt
tctttattaatagaaagtatcattagcatacgccgagcaaaaagcttaattgagcttggt
aatgctaagattgaaaaggcttatattaagcttaataattctgctatgcaaagcgagata
gaaaaatatcaacatttcataactcttcttgcaaaatgtgaaaatatagaatttataagc
gaaaaattaaacaacgccatttgtgatgtgagtgaaaatttagaaattaacattaagctt
gacaatatagatttaagcgcgattatagcaagattagagaatcaaaaggcaaaactagaa
aaagaaattgctaaaattaacgcaatgttaagcaatgaaaaattcctatccaaagcacca
aaagacattatcctacaaaatcaaaatgccttaaataatcttaaagagcaatttgaaaag
gtacagatggaacttaaaaatttaaagggttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (10)   
   Pfam (10)   
All databases (26)   

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