KEGG   Chromobacterium vaccinii: BKX93_12415
Entry
BKX93_12415       CDS       T04565                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
cvc  Chromobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:cvc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvc03021]
    BKX93_12415
Transcription machinery [BR:cvc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BKX93_12415
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_ECF Sigma70_r2 GerE HTH_28 HTH_23 DUF445 Terminase_5
Other DBs
NCBI-ProteinID: AOZ50716
UniProt: A0A1D9LHL4
Position
2662149..2662715
AA seq 188 aa
MASRKEMADFLESVEKRAFKQALYAVRHEDNALDIVQDSMMKLADRYAHAPAHELPLIFQ
RILQNTIRDHYRRSKVRSFVSTLLSSLIPTHAEDDSLDPLETLDVAADEAHTNPEQWYQR
KEVALMIDASLQLLPARQREAFLLRYWEGLDVAETALVMGCSEGSVKTHCSRANHTLAAI
LAQKGVLL
NT seq 567 nt   +upstreamnt  +downstreamnt
atggcaagccgcaaggaaatggccgacttcctcgagtcggtggagaagcgcgccttcaag
caggcgctgtacgcggttcggcatgaagacaatgcgctcgacatcgtgcaggactcgatg
atgaagctggccgaccgctacgcgcacgcgcccgcgcacgagctgccgctgatcttccag
cgcatcttgcagaacaccatccgcgaccactaccggcgcagcaaggtgcgcagcttcgtc
agcacgctgctgtcgtcgctgatccccacccacgccgaagacgactccctcgacccgctc
gaaacgctggatgtcgccgccgacgaggcgcacaccaatccggagcagtggtaccaacgc
aaggaagtggcgctgatgatagacgcgtcgctgcaactactgcccgcccgtcaacgcgaa
gcgtttctgctgcgttactgggaaggactggatgttgccgaaaccgctctggtcatgggt
tgctccgagggcagcgtgaaaacgcactgctcgcgcgccaaccacaccctggcggccatt
cttgcgcagaagggagttttgctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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