KEGG   Cyprinodon variegatus (sheepshead minnow): 107081586
Entry
107081586         CDS       T06110                                 
Name
(RefSeq) exosome complex component MTR3-like
  KO
K12587  exosome complex component MTR3
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107081586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107081586
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     107081586
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 107081586
NCBI-ProteinID: XP_015225228
Position
Unknown
AA seq 210 aa
GGAYSSSVCSCSSCNFGFLKQLCVFLCLRLTTDMRFAPFSCPERGSWIQGSQDKDFSLML
QESLQPAVCLHRYPRSQIEVNVMVLENSGSVLAHAVTCASMALADAGIEMYDLVLGCSLR
QDGASYVVDPTYPEENSWKSGGGEKRGGLTVAFLPSLNQVSGLQSDGEMAEETLTAGIRT
CIEGCYKLYPVVQQALMKAVRQAAPPPAES
NT seq 633 nt   +upstreamnt  +downstreamnt
ggtggtgcgtacagctcctctgtctgctcctgtagttcatgtaattttggctttttaaaa
cagctctgtgtatttctgtgcctcagactgaccaccgacatgcgcttcgccccgttctcc
tgcccggagcgcggctcctggatccagggcagccaggacaaggacttctctctgatgctg
caggagagtctgcagccggccgtctgcctgcacagatacccgcgctctcagatagaggtc
aacgtcatggttctggagaacagcggctcggtcctggcccacgctgtcacctgtgcttcc
atggcactggcagacgccgggattgagatgtacgaccttgtgctgggctgttccctccgt
caggacggcgcctcctacgtggtggaccccacgtacccagaggaaaacagctggaagtcg
ggcggcggggagaagcggggcggcttgacggtggccttcctgccgagtctgaaccaggtt
tctgggctgcagtcagacggtgagatggcggaggagactctgactgcagggattcggacc
tgcatcgagggctgctataaactgtatcctgtggtccagcaggccttaatgaaggccgtt
cgccaggccgctccgccaccggcagagagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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