KEGG   Cyprinodon variegatus (sheepshead minnow): 107082134
Entry
107082134         CDS       T06110                                 
Symbol
itga8
Name
(RefSeq) integrin alpha-8
  KO
K06584  integrin alpha 8
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510  Focal adhesion
cvg04512  ECM-receptor interaction
cvg04514  Cell adhesion molecules
cvg04810  Regulation of actin cytoskeleton
cvg04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107082134 (itga8)
   04514 Cell adhesion molecules
    107082134 (itga8)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107082134 (itga8)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107082134 (itga8)
   04810 Regulation of actin cytoskeleton
    107082134 (itga8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cvg04515]
    107082134 (itga8)
Cell adhesion molecules [BR:cvg04515]
 Integrins
  Integrin alpha subunits
   107082134 (itga8)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 107082134
NCBI-ProteinID: XP_015226138
Ensembl: ENSCVAG00000010937
Position
Unknown
AA seq 1055 aa
MEPVWDCASSAGMFMLGLLSVLWPAPNRVWSFNLYAEHPTVYSGPDGSYFGYSVDFYQAS
PERNTISVLVGAPKANTSQPGIVEAGAVYYCPWPGQPDSCKQIPFDISNNRMIRVNRTRE
PLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKKEGEKDPVGTCYVAVQNFSAYAEYSP
CRTSDPDPEGQGFCQAGFSVDFTKEGRLVLGGPGSFYWQGQVMTAGIAEILNGYSLKAIL
RRVPGEKQTGAADDTNDDSYLGYSVAVGEFTGDSEQELIAGVPRGAHSFGYVAMINSTNL
TFIHNFTGEQMASYFGYSVAVTDLNGDETDDILVGAPLYMEREMESKPIEVGRVYLYLQL
APLIFSQPIVLSGTYTFGRFGTAIAPLGDINQDGYNDVAVGCPFGGEDHGGRVLIFNGNR
DVSTKGLMLSQELRAARKAGGSLPGYGFTLRGGQDLDSNEYPDLIVGAFGAGEVSVYRSR
AVVSVEATMTLTPRILNPDDRQCRLPQTSNMVTCLKVDVCAAVSGVGIPNNVGLKAELQL
DWLKGTRGGVKRVLFLDTHETQRSGLLRLGQSRPQACLSYMIYLKEEDEFRDKLTPIALA
LNYSLAPPSGEQTLPPILNQYSSTFLQEHAYILLDCGDDNICIPDLQLSASMDRSELVIG
DDNLVMLTITATNQGEGAYETELYTRIPPEADYIGVERRVESLTQLNCEYKTINESRVVV
CDLGNPMVTGTELTVGLRFSVQRVEDSGPKISFELQIHSSNKDNSDSNLVSLNLTITASA
QLALRGVSHPSQVVLPFPNWEPKEKPVKEDDVGPQVTHIYELHNFGPSSIGQAELQIGWP
ARFHDENLLYAIEIQTDGPISCRTNTSLNPHGLEISSLQDTPELLGFLRNTTDLPHRHKR
SVSTAGSYSSKTLNCTNVSCLRITCMAGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYILN
STVSFMVISMPYRVQPSTLPQHKTSMGTHVLWGTPDVSFAVPLWVIILAILLGLLVLAML
TLAMWKCGFFDRARPPADDNISDQEKLTSDQTGEA
NT seq 3168 nt   +upstreamnt  +downstreamnt
atggagcctgtgtgggattgtgcctcctctgctgggatgtttatgctggggttgctctct
gtgctgtggccggcgccaaaccgcgtttggagttttaacctttacgcagagcatcccacg
gtttacagcggacccgatgggagttattttggatattctgttgatttctatcaagcaagc
cctgaaaggaacacgattagtgtgcttgtgggggctcctaaagcgaacacctcccagccg
ggcatcgtggaggctggagccgtctattactgcccctggcccggacagcctgatagctgc
aaacagattccctttgatatttccaataacagaatgattagagtaaaccgcaccagagag
cctctagagtttaagtcccaccagtggtttggagcatcagtcaggacgcacaaaggaaaa
gtggtggcctgtgctccactctaccactggcggacagtaaagaaagaaggggagaaggac
ccggtgggaacctgctatgtcgccgtccagaacttcagcgcttatgcagagtactccccc
tgcagaaccagtgacccagacccagagggacagggattctgccaggctggtttcagtgtg
gatttcaccaaggaagggaggctagtcctaggaggacctggaagcttctactggcaaggt
caggtgatgacagcagggatcgcagagatactcaatggctactctttaaaggcaatcctg
agacgagttccaggggagaaacaaaccggagctgcagacgacacaaatgacgacagctac
ctcggctactctgtggctgtgggagagtttacaggagactcggagcaagagctgatagcc
ggagtcccaagaggagcacacagctttggatatgtggcaatgatcaactccaccaatctc
accttcatccataactttacaggggaacagatggcgtcttattttggttactcagtggct
gtcactgatttgaatggagacgaaacggatgatatcctggttggagcaccgctctacatg
gaaagagagatggagagcaaacccatagaggtgggaagggtgtacctctacctgcaactt
gctccgctcatcttttctcaacccattgtgcttagtggtacctacacttttggacgtttt
gggacggctatagcaccactgggagacattaaccaggatggatataatgacgtggcggtg
ggctgtccattcggaggtgaggaccacggaggcagagtgttgatctttaacggtaacaga
gatgtgtccactaagggcctgatgctgagccaggagttgcgagcagccagaaaggccggc
gggagcttgcctggatacggcttcactcttagaggaggccaagacctggacagcaacgaa
taccctgacctgatagtcggggcgtttggcgcaggagaggtctcagtctacaggtctcga
gctgttgtgtctgtggaagctacaatgaccctaacacccagaatcctcaatcctgacgac
agacagtgtcgcttgcctcagacctctaacatggtgacctgcctgaaggtagatgtgtgt
gcagcagtgagtggtgtggggatccccaacaatgtaggtttaaaagctgagcttcagctg
gattggcttaaaggcacaaggggcggggttaagcgagtcctcttcttggacacccatgag
actcagcgctcagggctcctcagactgggtcaaagccgcccacaagcgtgtctgagctat
atgatttatctgaaggaggaggatgagttcagggacaaactgacccccattgctttggcc
ctgaactacagcctcgctccaccttctggggaacaaactcttccaccgattctcaaccag
tacagcagcacattcctccaggaacatgcttacatccttcttgactgtggtgatgacaac
atatgtatccccgacctacagctttctgccagcatggatcgctcagagttggtgattgga
gatgacaacctggtgatgctgaccatcactgcaacgaaccagggagagggggcgtacgag
acagagctgtacacacggattccaccggaggccgactacattggagtagagcgcagggta
gagtctctcactcagctaaactgcgagtacaagaccatcaacgagtccagggtggtggtt
tgcgatctcgggaacccgatggtgacaggaacagagctcaccgttggtttgaggttttca
gtccaaagggtggaagactccggaccaaaaatcagctttgagctacagatccacagctcc
aacaaggacaactctgacagcaaccttgtcagtttgaatctgaccattactgccagtgcc
cagcttgctttgcgcggagtgtctcatccctctcaggtggtgctgccattccccaactgg
gagcctaaagagaaacctgttaaagaggacgacgttggtccacaagtcacacatatttat
gagctccataactttggtcccagtagtattgggcaggctgagcttcagatcggctggcct
gcccgtttccatgatgagaacctgctgtacgccatagagattcaaactgacggcccaatt
agctgccggacaaacaccagcctcaacccacacggcctggagatctcctctctgcaagac
acgccagaactgctgggttttctgaggaacaccaccgatcttcctcaccgccacaaacga
tctgtcagcacagctggaagttacagcagtaagaccttgaactgcaccaacgtctcctgt
ctgaggattacgtgcatggctggtcggttggatcgaggccagagcgccgttgttaagata
agatcaagactttgggcacatacgtttttgcagcggcgtaacgacccctacattctaaac
tccacggtgtcctttatggtcatatctatgccctatcgtgttcagccatccacactgcct
caacacaaaacctcgatgggaacccatgtgttatggggcactcctgatgtttcgtttgct
gtgccactttgggtcatcatcctggccatattgctaggcctgttagtactggccatgctg
acgttagcgatgtggaagtgcggtttcttcgaccgagcacggccgccagcagatgacaac
atctccgaccaggagaagctaacatctgatcaaaccggggaggcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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