KEGG   Cyprinodon variegatus (sheepshead minnow): 107082220
Entry
107082220         CDS       T06110                                 
Name
(RefSeq) rano class II histocompatibility antigen, B alpha chain-like
  KO
K06752  MHC class II antigen
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04145  Phagosome
cvg04514  Cell adhesion molecules
cvg04672  Intestinal immune network for IgA production
cvg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    107082220
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107082220
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    107082220
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107082220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvg04147]
    107082220
Exosome [BR:cvg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107082220
  Exosomal proteins of epithelial cells
   107082220
  Exosomal proteins of breast milk
   107082220
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_2 C2-set_2 Ig_3 ig I-set
Other DBs
NCBI-GeneID: 107082220
NCBI-ProteinID: XP_015226263
Ensembl: ENSCVAG00000008892
Position
Unknown
AA seq 243 aa
MRFSALLILILNTYCVFSQIPHEATYFVGCFENGTSAVQYDFDGEEILYVDFSRKEIVFT
VPNFIYAHPDQLIASLSVLKDALNGEKMCQPLMEFVIKEVKPSSEEKDPPDHMIFPSREV
EPEEENTLICFVNDFYPPTVKVSWTKNGLPATKGVWISEYSPNSDQTFRMFSTLKFTPTE
GDIYSCTVEHPALETPKTRILEIEFNKADPSLWPVVYCGVGVALGILGITVGVFFIVKAQ
HLN
NT seq 732 nt   +upstreamnt  +downstreamnt
atgaggttctctgctctccttattctcattctcaacacctactgcgtcttctctcaaatt
ccccatgaagcaacctattttgtgggctgctttgagaacggcacttctgcagtacagtat
gattttgatggtgaagaaattttatatgttgatttttcaaggaaggagattgtgtttact
gtgccaaacttcatctatgctcatccagaccagctcatagcatcgttgagtgtccttaaa
gatgctctaaacggcgaaaaaatgtgtcaacccttaatggagtttgttataaaggaagtt
aaaccttcatctgaagaaaaggaccctccagaccacatgatattcccttcaagagaggta
gaacctgaagaagaaaacaccctcatctgctttgtgaatgatttctacccacctactgtc
aaagtcagctggactaaaaatggcctcccagctacaaagggggtgtggatcagtgaatac
tctcccaatagcgaccaaaccttccgaatgttctcaacactgaagttcacacccacagag
ggggacatttactcctgcactgtagagcatcctgcattggagactccgaaaacaagaatc
ttggaaattgaattcaacaaagcagatccaagtctttggccagttgtttactgtggagtc
ggtgtggctcttggcattttgggaatcactgtgggagtgttttttattgtcaaggcacaa
catttaaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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