KEGG   Cyprinodon variegatus (sheepshead minnow): 107084384
Entry
107084384         CDS       T06110                                 
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD7-like
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107084384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107084384
   03016 Transfer RNA biogenesis [BR:cvg03016]
    107084384
Enzymes [BR:cvg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     107084384
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     107084384
Transfer RNA biogenesis [BR:cvg03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    107084384
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 Polbeta TUTase
Other DBs
NCBI-GeneID: 107084384
NCBI-ProteinID: XP_015229681
Position
Unknown
AA seq 783 aa
MDNGTAWIQPEQKGLANYSMWMQLWETSHANAGLQPHHQRNFAVQNTNLDSYGESYRHLA
PTPGTAFGKLPRADGGGERGSVRRKGSLSPSSSSLDSEADSSSPHGSLLQIDNLNAADEA
EQFLHNGEQKVKENNLRQPLHVQQHCRSKQPPGGHTPTGMKNQQQQHYQPHHSGRRRQLN
RANTFHGFNPLLSYCFNGLDSSYSLWKTRRYSPGVNGLHEEIMDFFSFMSPRPEEEAMRR
DVVNRIESVIKDLWPTARVEIFGSFSTGLYLPTSDIDLVVFGKWDHPPLQDLEQALKKHN
VAGSYPIKVLDKASVPIIKLTDHETKVKVDISFNVETAVKAAQFIKSYLKRYTVLPPLIF
VLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDTRRSNINLGILLIEFFELYGR
DFNYMKTGIRVRNGGAYLSKEEMLKAMGHGNRPSMLCIEDPVQPGNDVGRSSYGVLQVKQ
VFDFAYLVLSHGLSPLCAYPNREYDSTLGRIVKVSPEVLAYREWIIKTWGAKQSAKLENN
DVETCEQELSRMMLIEDQRDSPSPLSSDSPSPVFPPSPQHHSSSSSACSLSSSSSGSDIE
SDSPKSSNGSIQLHPLNLALIQMAADPGATHPASFIHAPHQISLPENFTILPSDSQFYHE
NPPSINIVHRHTAQAPQFPRHSKPASPLLTHLHHSQVGGLLRHPYAQRSYSQGSLEPHKF
GSKHNQVGSFQCHNPSQGNLGLQHRFVYQTHMVSCFKNQQQQYNRKAWRRRKKDISPTLN
QSQ
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggataacggaacggcttggatccagccggagcagaagggactggccaattattccatg
tggatgcagctttgggagacctcacacgctaatgctggcctccagcctcaccaccagcgc
aactttgcggtacaaaacaccaacttggactcttacggcgagagctacaggcatttagct
ccaacacctgggactgcgtttgggaagctgccgcgggcagacggcggcggagagagggga
agtgtccggaggaagggctcgttgtcgccgtcctcttcctctctggactcggaggccgac
agctcctctccccacggctctttgcttcaaattgacaatttgaacgccgcagacgaggcc
gagcagtttttacacaacggtgagcagaaggtgaaggagaacaacctccgacagcctctt
catgttcagcagcactgtcgcagcaagcagccgcccggcggccacacccccaccgggatg
aagaaccagcagcagcagcactatcagccccatcactccggccgcaggaggcagctgaac
agggccaacactttccacggcttcaacccgctcctctcctactgcttcaatggcctggac
tcttcctacagcctgtggaaaaccaggcgatacagcccgggcgttaatggtctgcatgag
gaaataatggacttcttcagcttcatgtcacccagacctgaagaggaggccatgagaagg
gatgttgtgaacagaattgaaagtgtcatcaaggatttgtggcccactgctcgggtggaa
atctttggcagcttcagcacaggactatatcttcctacaagtgacatcgatctagttgtg
tttgggaagtgggatcatcccccattgcaggatctggagcaagccctgaagaaacacaat
gtggctggcagctatccaatcaaagtcctcgacaaagcttctgttccaatcattaaactc
accgatcatgagaccaaagtgaaagttgacatcagcttcaatgtggagactgctgtgaaa
gctgcccagttcattaaaagctaccttaagagatacactgttcttccaccattgatcttc
gtcctgaagcagtttctgttgcagagagatctaaatgaagtctttactggaggcatcagc
tcatatagccttatactaatggctatcagcttcttgcagttacaccctaggattgacaca
cggcgctccaacataaacctgggcattctgctgatagagttctttgagctttatggtcgc
gattttaactacatgaaaacgggaatccgggtgagaaatggaggagcttacctgtccaaa
gaagagatgctgaaagccatgggccatggaaaccggccctccatgctctgcatagaggat
cctgtacagccaggaaacgatgttggaaggagttcatatggagtcctgcaagtcaagcag
gtctttgattttgcatatcttgttttaagccatggtttatctcctctttgtgcatatcca
aacagagagtatgacagcactttaggacggatcgttaaagtcagcccagaggtgttggcc
tacagggaatggataatcaagacgtggggtgccaaacagagtgccaagctggaaaacaat
gatgtggagacctgtgagcaggagctttctagaatgatgctgattgaggatcaaagggat
tccccgtctcccctgagctcagactccccttctccagtgtttcctccaagcccgcaacat
cattcctcgtcttcctcagcttgctcactttcttcatcttcctctggaagcgacattgag
tctgactctccaaaaagtagcaatggttctatccagctccacccgctaaacttggcttta
atccagatggctgcagacccaggggccacacatccagcaagctttatccacgctccacat
cagatctctcttccagaaaactttaccatcctgccgtccgatagccagttctaccacgag
aaccctccttctattaacattgtgcaccgtcacacagcacaagctccacaattcccccgg
cattctaagcctgccagccctctccttacacatctccaccactctcaggttggagggctg
ctgcgccacccgtacgcccagagatcttattcccaaggctcactggagccccacaagttt
ggctccaagcacaaccaagttggtagcttccagtgccataatccctctcaaggcaacttg
ggtctgcagcaccggtttgtttaccagacgcacatggtgtcatgtttcaaaaaccagcag
cagcagtacaaccgtaaggcttggcgacgcaggaagaaagacattagtcccactttgaac
cagagccaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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