KEGG T06110: 107084411

Cyprinodon variegatus (sheepshead minnow): 107084411

Entry

107084411         CDS       T06110

Symbol

rtn1

Name

(RefSeq) reticulon-1 isoform X1

K20721

reticulon-1

Organism

cvg Cyprinodon variegatus (sheepshead minnow)

Brite

KEGG Orthology (KO) [BR:cvg00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvg04131]
    107084411 (rtn1)
   03036 Chromosome and associated proteins [BR:cvg03036]
    107084411 (rtn1)
Membrane trafficking [BR:cvg04131]
Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    107084411 (rtn1)
Chromosome and associated proteins [BR:cvg03036]
Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    107084411 (rtn1)

SSDB

Motif

Pfam:

Reticulon DUF4736

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

Position

Unknown

AA seq 708 aa
MSAQPGEELGSDGRWFGDDRERNGLFGEEFKQRGGDATADLDHQRFHPFQEDGERPPVAM
ETASTDDPMSGLFRKPMMDDGDVYTSLLSNQSFTASREASYLSDDLKPSNHSPSSALDDF
TTDTYSFTSKTKASNLSDNSPKSLLGSDKTESYNYMDISHGEEHHGSRGSADHDLLGSYM
DKNPGGDEEDDDENLGPALGSHSFPYVEDPSDEEMNDFRSFRNLGGTPQSASPVKITLTG
SQPAKAEPQQLPPLVGVSERENVLSVGQQGVPTVTLSEPEDDSPASTPNASPTRKQFSSE
EMFKVESGKPAAFRSNPGPQPSSRDNEGSSAESGDSEIELVSEDLPKASSNPFTEAPKGK
GTSSLPSNPFDSPPVTKAGIGLAGGPAPPTAYSILREEREAELDSDLVIESASEESPKRE
QGVGGPKQGAIPPSPLVSSTSPPRSTPEAAPVQPLISEKAKNPIKAEEDRPSKPKPPTAA
VPPEVRSEKPQQDDTPLQQGKGELGKPAVTMMLEGFNKQKAIDLLYWRNVKQSGAVFSSV
LLLLFSLTQFSVVSVGAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLEMEISLS
PDQISKYADKILLYSNTCMKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLILA
VVSMFTLPVVYEKHQAQIDQYVGLIRTQVNSVVGKIQAKIPGAKRKEE

NT seq 2127 nt +upstreamnt +downstreamnt
atgtctgctcagcccggcgaggagctaggctcggacgggaggtggttcggggatgaccgt
gagaggaacggcctgttcggggaggaattcaagcagaggggcggcgatgcgacggccgac
ctggatcatcaacgatttcatcctttccaggaggacggggaaaggcctcccgttgctatg
gaaactgcatccacagatgatcccatgtctggcctgtttaggaaacccatgatggacgac
ggtgacgtgtacacctccctgctgtccaatcagagcttcacagccagccgggaagcctcc
tacctgtcggacgacctgaagccctcaaaccactctccctcatctgctctggatgacttc
accaccgacacctatagcttcacctccaaaaccaaggcgtccaacttatccgacaacagc
ccaaaatcactgctgggctccgacaagacagaatcctacaactacatggatatcagccat
ggggaggagcatcatggcagcaggggctcagctgaccatgacctactggggagctacatg
gataaaaaccctggaggagatgaagaagatgatgacgagaacctcggtccagcactaggt
tcccactccttcccctatgtggaggatccatctgacgaggaaatgaatgacttccgctcc
ttccgcaatctgggcggcaccccccagtcggccagcccagtaaagatcaccctgactggg
tcccaacctgctaaagctgagccccagcagctcccccctctggtcggcgtgtccgagcgt
gaaaacgtcctgagtgtgggtcagcagggtgttcccacagtgaccctgtcggagccagag
gacgacagccccgcctccactcctaatgcttccccaacaagaaaacaattttcctctgag
gagatgttcaaggttgagtctggaaagcctgcagccttcagaagcaaccctggcccacaa
cccagcagcagggacaacgagggcagcagtgcagagtccggagactctgagatcgagctg
gtctctgaagaccttcccaaggccagtagcaacccatttactgaggctccaaagggcaag
ggtacctccagcctgcccagcaacccctttgatagcccccctgttaccaaggctggcatt
ggccttgctggcggccctgccccacccacagcctacagcattttaagggaggagagagaa
gcagagcttgacagtgatctcgtcatcgagtctgcctctgaagagagccccaagagggag
cagggcgtcggaggccccaaacagggagccatccctccatcgcctctggtctcctccacc
agccctccccgcagcacccctgaggctgcgccagtccagccactgatttctgaaaaggcc
aagaaccctatcaaagcagaagaggatcgtcccagcaagcctaagcctccaaccgctgct
gtgcctccagaggtgagatcagaaaagcctcagcaggatgacacgcccctccagcagggt
aagggagagctgggaaagcctgctgtaaccatgatgttggagggcttcaacaaacagaaa
gcaattgacctcctctactggaggaacgtgaagcagtctggtgccgtgttcagcagcgtc
ctcctgctccttttctccctgacccagttcagcgtcgtcagtgtcggggcctacttagct
ctggcggcgctctctgccaccatcagcttcaggatctacaagtctgtgctgcaggccgtg
cagaaaactgatgagggacatcctttcaaggcttatctggagatggagatctctctgtct
ccggaccagatcagtaaatatgccgataagatcctgctgtatagcaacacctgcatgaag
gagctgcgcaggctgtttctcgtacaggatctggttgactctttgaagtttgcagttctg
atgtggctgctgacctatgtgggtgcactcttcaatggactgacactgctcatcctagct
gtggtgtcaatgttcaccttgccggtggtctatgaaaaacatcaggcgcagattgatcaa
tatgtgggattaatacggacccaggtcaactctgtggtgggaaagatccaagcgaagatc
cccggggccaagaggaaggaggagtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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