KEGG   Cyprinodon variegatus (sheepshead minnow): 107088504
Entry
107088504         CDS       T06110                                 
Symbol
cyld
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
  KO
K08601  ubiquitin carboxyl-terminal hydrolase CYLD [EC:3.4.19.12]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04217  Necroptosis
cvg04622  RIG-I-like receptor signaling pathway
cvg04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    107088504 (cyld)
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    107088504 (cyld)
   04625 C-type lectin receptor signaling pathway
    107088504 (cyld)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cvg01002]
    107088504 (cyld)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvg04121]
    107088504 (cyld)
Enzymes [BR:cvg01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     107088504 (cyld)
Peptidases and inhibitors [BR:cvg01002]
 Cysteine peptidases
  Family C67
   107088504 (cyld)
Ubiquitin system [BR:cvg04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    107088504 (cyld)
SSDB
Motif
Pfam: CYLD_phos_site CAP_GLY UCH
Other DBs
NCBI-GeneID: 107088504
NCBI-ProteinID: XP_015236208
Ensembl: ENSCVAG00000020619
UniProt: A0A3Q2DE70
Position
Unknown
AA seq 949 aa
MSSALWSGDKASGGFREDWRFYMVVKECSVEKPTQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLSLDERDVVELDEKLAELLFPITNCEERYNLLSDEERLERVRD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEEECGVFVALDKLELWEDDDNESLGQLEVNQIRLEDDQDYPPLEINSRVVLREEP
ERGTVIFCDLLPGNESHGYYVGVDMDNPIGNWDGMIEGKLVCNFASLEHTRLVHISDVMP
EYPMQNQRLPMHSFAPRGSDKSSSGQSKPKSKGLAHQCGSRSKSEFYYTLNGSSLDPPAQ
PKSKSTWYIDEVGEDPAKSLTDTPPEFNQSPPPSRAPPATSLSSDNKFHSLPFSLNRKTP
ENISQGPISLSVGSVMGEQLEPPSPANPPSPRPPTPPRGQSGLEVGSLVEVKENPPLCGV
IRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCRPDSRFPS
LHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNSCYLDSTL
FCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVMKLRRILE
KVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMDKKDKVGV
PTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLEDTPRE
CRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHRHNKLSVPKELQEG
TGRQGGFPRQRMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNGFNIPQVS
PCPEVEAYLKMTPEELHTLDPKSIQGQARRLLCDAYMCMYQSSTMSLYK
NT seq 2850 nt   +upstreamnt  +downstreamnt
atgagctctgccctgtggagcggggacaaggctagcgggggcttcagggaggactggcgc
ttctacatggttgtgaaggaatgctctgtggagaagcctacccaaaagaccctgaggatt
ccccgtggtagcctcggccaggcctgccaggagcgcaacagcctgggccgaacgcttccc
ccatgcaagggcaagaagagcctccgtatcctggaccagaccaacgtggtgctgagccta
gatgagcgggacgtggtggagctggacgagaagctggctgagctgcttttccccatcacc
aactgtgaggagcgatacaacttgctctctgacgaggaacggctcgaacgcgtccgagac
atcgactgtggctccaaggtgcgcgtccagctgcgctcgggggatgaacctctacctgga
gtggtgcgtttcaaaggctcgctgcttcccgaccgagccctctccggaatctggtttgga
gtcgagctcctggaggagggtcggggccagggcttcacggagggctcctaccagggccgg
cagctcttccgttgtgaggaagagtgtggcgtgtttgttgccttggataagctggaactc
tgggaggacgatgataatgaaagtttgggccagctagaggtgaatcagatcagactggag
gacgaccaggactatcctccgctggagatcaactccagggtggtgctgagagaggagccg
gagagaggaaccgtcatcttttgtgacctgctaccagggaatgagagccatggttactat
gtgggagtggacatggacaatcctatagggaactgggatggtatgattgaagggaagctg
gtgtgtaattttgccagtttggagcacactcgactcgtccacatcagtgacgtaatgcca
gaatatcccatgcagaaccaaaggctgccaatgcacagttttgcccccagaggcagtgac
aaatcctcctctggccaaagcaaaccaaagagcaaaggattagctcatcagtgtggcagt
aggagcaagtctgagttttactatactttaaatggcagctctcttgaccccccagctcag
cccaaatccaaaagcacatggtacattgatgaagtaggagaagaccccgccaagtcactc
accgacaccccacctgaattcaaccagtctcctccaccatccagagccccacccgcaact
tcactgtcaagtgacaacaagttccactcgctgccctttagcctgaaccgtaagacccct
gagaatataagccaagggcccatctcactttctgttgggtctgtaatgggagagcagctc
gagcctccatcgcctgctaaccctccgtctcctcggcctccgacgcctccccgagggcag
tcaggtcttgaggtgggctcactggtggaggtgaaggagaacccccctctatgtggtgtt
atccgctgggtgggcctgcctcctggcctgctggagcctttggctggactggagctggaa
gaagagtgccctggatgcactgatggcaccttcaaagggactcgctacttcacctgccca
cccaaaaaagctctgtttgtgaagctcaaatgttgtcggcctgactcccgcttcccctcc
ctgcaccattcctccaaccccatagagcggtgcaactctattgcatttggaggttatctg
agtgaggtagtgcatgagaacactccacctcggacagagaacgatggtctggatgttatg
gtggggaaaaagaaaggcattcaaggccactacaactcctgctacctggattcaactcta
ttctgtcttttctccttcagctctgtactggacacggttctgctgaggccacgttcaaaa
actgacgtggaatattacagagagactcaggagctgctacgcacagagatagtcaatcca
ctgcgcatacatgggtacgtttgtgccacgaaagtgatgaagctcaggaggatcctcgag
aaagtagaagctgcctcaggatttacgtctgaagaaaaagatcctgaggagttccttaat
atcctgtttcatcacatattaagagtggatccactcctgaagctaaggtctgcaggtcag
aaagtccaggactgttacttttaccaaatctttatggacaagaaggacaaggtcggagtt
ccaaccatccagcagcttctggagtggtccttcataaacagtgacttaaaatttgcagag
gctccgtcttgccttatcatccagatgccacgcttcggcaaggacttcaaaatgttcaac
aagatttttccctccttggagttagacatcacagaccttcttgaagacactccgagggaa
tgtcgcatctgtggaggcctggctctctacgaatgcagagactgttatgaggacggggat
atcactgctggcaagattaagcagttctgtgaaaagtgcaatacacaggttcacctccac
ccgagaagaaaagcccatcgacacaacaaactatccgtccccaaggagctgcaggaaggc
acggggcgtcagggcggtttcccccgccagcggatggagctgtttgctgtgctgtgcatc
gaaaccagtcactacgtggccttcgtcaagtacggcagcgccgattctgcctggcttttc
ttcgacagcatggcggaccgtgatgggggccagaatggtttcaacataccgcaggtgtct
ccctgtcccgaagtggaagcctatctgaaaatgaccccagaggagctgcacaccttggac
cccaagagcatccagggccaggcgcgacgtctgctctgcgacgcctatatgtgcatgtat
cagagctcgaccatgagcctttacaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system