KEGG   Cyprinodon variegatus (sheepshead minnow): 107091414
Entry
107091414         CDS       T06110                                 
Symbol
actn1
Name
(RefSeq) alpha-actinin-1 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510  Focal adhesion
cvg04520  Adherens junction
cvg04530  Tight junction
cvg04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107091414 (actn1)
   04520 Adherens junction
    107091414 (actn1)
   04530 Tight junction
    107091414 (actn1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    107091414 (actn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvg04131]
    107091414 (actn1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cvg04812]
    107091414 (actn1)
   04147 Exosome [BR:cvg04147]
    107091414 (actn1)
Membrane trafficking [BR:cvg04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    107091414 (actn1)
Cytoskeleton proteins [BR:cvg04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     107091414 (actn1)
Exosome [BR:cvg04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107091414 (actn1)
  Exosomal proteins of colorectal cancer cells
   107091414 (actn1)
  Exosomal proteins of bladder cancer cells
   107091414 (actn1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 EF-hand_5 XisI
Other DBs
NCBI-GeneID: 107091414
NCBI-ProteinID: XP_015240819
Ensembl: ENSCVAG00000016791
UniProt: A0A3Q2EBU3
Position
Unknown
AA seq 890 aa
MEHCDGENQYMQPEDDWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDG
LKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNAKM
TLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCAL
IHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYV
SSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRLP
ENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVS
DINNAWGNLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTEGKEELLQKRDY
ETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQRICDQ
WDALGAMTMKRTEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVHTIE
EIQGLSTAHEQFKATLPEADKERQSILGIHNEIAKIVQTYHVNMAGTNPYTTINPQEINA
KWDKVRQLVPQRDQALIEEHARQQNNERLRRQFATQANVIGPWIQNKMEEIGRISIEMHG
TLEDQLTHLRQYEKSIINYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLT
TIARTINEIENQILTRDAKGISQDQLNEFRASFNHFDRDHSGTLGAEEFKACLISLGFDI
ANDAQGENEFSRIMSVVDPNRMGIVTFQAFIDFMSRETADTDTADQVMASFKVLAGDKNY
ILADELRRELPPDQADYCIARMAPYTGPDAVPGALDYMSFSTALYGESDL
NT seq 2673 nt   +upstreamnt  +downstreamnt
atggagcactgcgacggagagaaccagtacatgcagccggaggatgactgggaccgggat
atgctgctggatcctgcctgggagaagcagcagaggaagacttttacagcttggtgcaac
tcgcacctcagaaaggcgggaacgcagatcgagaacatcgaggaggacttccgggacgga
ctgaagctcatgctgctgttggaggtcatctcaggtgaacgtttggcaaaaccagaaaga
ggaaaaatgagagtccacaagatctccaatgtcaataaagcgcttgacttcatcgccagt
aaaggagtgaagctggtctctattggagcagaagagatcgtagacggtaatgctaagatg
accctgggaatgatctggaccattatcctccgcttcgccatccaggacatctcagtggaa
gagacgtcggccaaagagggcctcctgctgtggtgccagaggaaaactgctccctacaag
aatgtcaacatccagaacttccacatcagctggaaagatggcttgggcttctgtgcgctc
attcatcgacaccgtccggaactcatagactatggaaaactgcgcaaggacgaccccatg
accaacctgaacactgcctttgacgtagcagagaagtacctggacatccccaaaatgttg
gatgcagaagacattgtgggcactgcccgtccggatgagaaggccatcatgacctacgtc
tctagcttctaccacgccttctcaggcgcccaaaaggcagagacggcggccaacaggatc
tgcaaggtgctggctgttaaccaggagaatgagcagctgatggaggactatgagaagctg
gccagcgacctgctggagtggatccgtcgcaccatcccctggctggaaaaccgattgcct
gagaacaccatgcaggcgatgcagcagaagctggaggacttcagggattaccgccgcctc
cacaagccgcccaaagtgcaggagaaatgccagctggagatcaatttcaacaccctacag
accaaactgaggctcagcaaccggcccgccttcatgccctcagagggaaggatggtctcg
gacatcaacaacgcttggggaaatctagagggagcagagaagggctacgaagagtggctc
ctcaatgagattcgccggctggagcgactcgaccatctggcagaaaaattccgtcagaaa
gcggcgatccacgaagcctggaccgaaggcaaagaggaattgctgcagaagcgggactac
gagactgcctccctgtcagagatcaaagctctgctgaagaaacacgaggcctttgagagc
gacctggcagctcaccaggatcgtgtcgagcaaattgcagctattgcgcaggagttaaat
gagctggactactatgactcccccagcgtaaatgctcgctgccagcggatctgcgatcag
tgggacgcactgggagctatgaccatgaaacgcaccgaggcgctgcagagaacagagaag
ctgctggaaaccatcgaccagctttaccttgaatttgccaaaagagcagctccattcaac
aactggatggagggcgccatggaggacctgcaggacaccttcattgttcacacaattgaa
gaaatccagggactgagcacagcccatgagcagttcaaagccacactgccagaggccgac
aaagagcggcaatctatcttgggcattcacaatgagatagccaagatagttcagacctat
catgtgaatatggccggcaccaacccctacacaaccatcaacccacaggagatcaatgct
aaatgggacaaggtgaggcagctggttcctcagcgcgaccaggctctgatcgaggaacac
gcccggcagcagaacaacgagcgtctgcgcaggcagtttgccacacaggccaacgtcatt
gggccctggatccagaacaagatggaggaaatcggcaggatctccatcgaaatgcacggc
accctggaggaccaactgacacaccttcgccagtacgagaagagcatcatcaactacaag
ccaaagatcgaccagctggagggagaccaccagctcattcaggaagctctcatctttgac
aacaaacacaccaactacacaatggagcacatccgtgtgggctgggagcagctactcacc
accatcgcccgcaccatcaatgaaatcgagaaccagatcctgacacgagacgccaagggc
atcagccaggaccagctgaacgagttccgagcctccttcaaccacttcgacagggaccac
tcgggcactctaggcgcagaggagttcaaggcctgcctgatcagcctgggcttcgatatc
gccaacgacgcgcagggggaaaacgagttctcccgcatcatgagcgtagtggatcccaac
agaatgggcatcgtcaccttccaggccttcatagacttcatgtcccgtgagacggccgac
acggacacggcggaccaggtcatggcgtccttcaaagttcttgctggggacaagaactat
atcttagctgacgagctgcgccgagagctgcctccggaccaggccgattactgcatcgcc
cgcatggccccttacaccggccctgacgcggtgcccggggccctcgactacatgtccttc
tccacggctctatatggagagagcgacctctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

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