KEGG   Cyprinodon variegatus (sheepshead minnow): 107091977
Entry
107091977         CDS       T06110                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
  KO
K08601  ubiquitin carboxyl-terminal hydrolase CYLD [EC:3.4.19.12]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04217  Necroptosis
cvg04622  RIG-I-like receptor signaling pathway
cvg04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    107091977
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    107091977
   04625 C-type lectin receptor signaling pathway
    107091977
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cvg01002]
    107091977
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvg04121]
    107091977
Enzymes [BR:cvg01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     107091977
Peptidases and inhibitors [BR:cvg01002]
 Cysteine peptidases
  Family C67
   107091977
Ubiquitin system [BR:cvg04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    107091977
SSDB
Motif
Pfam: CAP_GLY UCH
Other DBs
NCBI-GeneID: 107091977
NCBI-ProteinID: XP_015241724
Ensembl: ENSCVAG00000015709
Position
Unknown
AA seq 996 aa
MRTIFFTVRRERGLNSRRGAAAADTDTSEMSGVHEQSRKRRPFKAFLITTDLQVQDDLEG
LIVLKRGFICSEQDQGKIRRDALWVKVLDNGLMVKIEKKYLLEVALDLVGLVEPVQDPEV
RLSLLNNPNNLRQLASLPINAPLWVQIGPQNELAEAELKYIGPLSGGSNALYFGVELKGS
AAGRGTCNGSYKGHRYFSCPDACGLFVPVSHVRLRSWSSKNNGDVQEKTRENPRRSNHAV
NGHRSNNERSAHHHLRRLSFHHHHPKNQAQAVLSRTTESAPVAVNNNLRGSTSPPPFHLG
QRVSVSLEGIAHAGEVRFCGALPGRVQSAMYVGILLDAPTGNWDGFYKEQRLCHIPSPLY
GLLLPVNVVSTEQTPQHPHPLSQVPKSILKPTLSPISKQSTSSPSAPAPKIPLLPPNRQG
LKAPPLPPPKPSVRHPLTAPVPPPKPQNLAPAATPQQLEHTNGIHSPASPLRSADVYDDE
EEEDDDDEAEGYGETGEHMELEVGSMVEVNNPPLFGVIRWIGHISGVQELVAGIELEQEL
SAGTDGSYLGERHFRCPNNKGLFIKLRNCRRDSRFPVPEKPVNQVERCNSIAFAEWGSER
VDEHTPPVDGDEARRIYEGSKRGIQGHLNSCYLDATLFSLFSCCSSADWVLFWPSDAETD
QSSKQAQELLRCEIVNPLRRNGYVCASKTMALRRLLEAASSDASFTNQEKDPEEFLNKLF
QLLRVEPLLKIRSMSQQAQECHLYQLFPPTLPISPASSPVPIISPASMRVASVQALLESS
FLHAGLKFVEAPSCLLLLMPRFGKDFKMFDAILPTLSLDITDLLDDTLRQCSICQAVAEW
ECSQCYGDLEITPGRLKQYCQTCKTQVHSHRNRASHKPEKINVPQGSWSGPLHYARQRMS
LFAVTCIETSHYVSFVKHGPQASDWLFFDSMADRDGGENGFNIPRVKACPEVGRYLGLSE
EELSRVDASSVKESVRRLLCDSYMCLYHSPELSLYK
NT seq 2991 nt   +upstreamnt  +downstreamnt
atgagaacaattttctttaccgtccgtagagaaagagggcttaattctcgccgtggagcc
gctgccgctgatacagacacctccgagatgtcaggagttcacgagcagagcaggaagcgg
cgtcccttcaaggcgttcctgatcaccaccgaccttcaggtccaggatgatctggagggt
ctgattgtgctgaagaggggcttcatctgctccgaacaggaccagggcaagatcaggagg
gacgccctctgggtgaaggtgttggataacggcctcatggtaaagatagaaaagaagtat
ctgctagaagtggcacttgaccttgttggattggtggagcccgtccaggaccccgaagtt
cggcttagccttttaaacaatccaaacaacctgcgacagttggcctccctccccatcaac
gccccgctgtgggtccagattggcccgcagaatgagctggccgaggcagaactcaaatac
atcgggccactcagcggaggaagcaacgcgttatattttggagtggagctaaagggctca
gcagcaggcagaggaacctgtaacggttcttacaaaggtcaccgctacttctcctgcccg
gacgcctgcggcctgttcgtccccgtgagccacgtgcggctccgcagctggtccagcaag
aacaacggcgacgtgcaggagaaaaccagggaaaacccccgccgcagcaaccacgccgtc
aacggccaccgcagcaacaacgagcgctctgctcaccaccacctgcgtcggctaagcttc
caccaccatcaccccaagaaccaggcgcaggccgtgctctcaaggaccacggagtcggct
cctgtcgccgttaacaacaatctgcgtggctcgacatcgcctccgccgtttcacctcggt
cagagggtgtccgtcagcctggagggcatagcccacgcgggggaggtgcggttctgcggc
gcgctgccgggccgagtccaatctgcgatgtacgttgggatccttctggacgctcccacc
ggtaactgggacggcttttataaggaacagaggctctgccacattccctctcctctctat
gggctcctgcttccagtaaacgtagtctctacagaacaaaccccccagcacccacatcct
ctctcccaggttcccaaatccatcctaaagccaacgttgtctccaatatctaaacaaagc
acctcctcgccttctgctcctgctcctaagatacccctcttaccacctaacagacaagga
ctcaaagcccctccccttcctcctccaaaaccctcagtcagacaccccctcacagcgcca
gtgcctcctccaaaacctcagaacctggccccagccgccacaccgcagcagctggagcac
acgaacggcatccacagccccgcctcgcctttgaggtctgcagacgtctatgacgacgaa
gaagaggaggacgacgacgatgaagcagaggggtatggagagacgggggaacatatggag
ctggaggtggggtcaatggtggaggtgaacaacccgccgctttttggggttatccgatgg
attggtcacattagcggcgtccaggagctggtggcagggatcgagctggagcaggagctg
tctgctggaacagacggcagttaccttggagaacgccacttccgttgccccaacaacaag
gggctgttcatcaagcttcgcaactgcagacgggactccaggttccccgtccccgagaag
cccgttaatcaggtggagagatgcaactccatagcctttgcagagtggggcagcgagcgg
gtggacgagcacactccgccggtggacggcgacgaggccaggcggatctacgagggctcg
aagagaggcatccagggtcacctcaactcctgctacctggatgcaacgttgttcagtttg
ttctcctgctgcagctcagcagactgggttttattttggccgtctgacgcagaaacggac
cagagctccaaacaggctcaggagctgctccgctgcgagatcgtcaacccgctgcgaagg
aacggttacgtctgtgccagtaagaccatggcattgaggcgcctgctggaagccgccagc
agtgacgccagctttaccaaccaggagaaagatccagaggagttcctgaacaagcttttc
cagctcctgagagtggagccgctcctaaagattagatcaatgtctcagcaggcacaggag
tgccacctctaccagctgtttccaccgacgctccccatctcccccgcctcctcacccgtc
cctatcatctctcctgcgtccatgcgggtcgccagcgtccaggccctgctggagtcctcc
ttcctgcacgcaggcctcaagtttgtggaggctccctcctgtctgctcctgctgatgcct
cgctttgggaaggactttaaaatgtttgacgccatcttgcccaccctcagcctggacatc
actgacttgctggatgacactctgagacagtgcagtatctgccaggctgtagctgagtgg
gaatgttcgcagtgttacggagacctggagatcactcctggacgtctaaagcaatactgc
cagacctgtaaaacacaggttcacagtcacaggaatcgagcttcccacaagccagagaag
atcaacgttcctcaggggtcgtggtcggggcctctgcattacgctcgccagcgaatgtct
ctgtttgcagtgacgtgcatcgaaaccagccactatgtgagcttcgttaagcacggaccc
caggcctccgactggctgttcttcgacagcatggcagaccgagacggtggcgagaacggc
ttcaacatcccccgagtgaaagcgtgtcctgaggtgggccgctacctgggtctgtcggag
gaggagctaagcagggtggacgcctcctctgtgaaggagtcggtgcgccgactgctctgc
gactcctacatgtgcctgtaccacagcccagagctcagcctctacaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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