KEGG   Cyprinodon variegatus (sheepshead minnow): 107092443
Entry
107092443         CDS       T06110                                 
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107092443 (vps28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvg04131]
    107092443 (vps28)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvg04147]
    107092443 (vps28)
Membrane trafficking [BR:cvg04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    107092443 (vps28)
Exosome [BR:cvg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107092443 (vps28)
  Exosomal proteins of other body fluids (saliva and urine)
   107092443 (vps28)
  Exosomal proteins of colorectal cancer cells
   107092443 (vps28)
  Exosomal proteins of bladder cancer cells
   107092443 (vps28)
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 107092443
NCBI-ProteinID: XP_015242421
Ensembl: ENSCVAG00000020735
UniProt: A0A3Q2DF56
Position
Unknown
AA seq 223 aa
MFHGIAGSGGVGAAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVSPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDEFCRKYRLDCPLAMERIKEDRPITIK
DDKGNQNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VNLWLSTLSGMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtttcatggaatagcaggcagcggaggagtaggggcagcaccagctaataaacctgag
ttgtacgaggaagtcaaactttacaaaaatgcacgggaacgagaaaagtatgacaacatg
gcagagttgtttgccgttgtaaagaccttgcaggcattggaaaaggcttacatcaaagac
tgtgtatcccccaatgagtacacagctgcatgctccagactcttggttcagtataaagct
gctttcaaacaggtccaaggctctgatgtgggctccattgatgaattttgcaggaaatac
agactcgactgccctcttgcaatggagaggattaaggaggatcggccaattaccatcaaa
gatgacaagggcaaccagaaccgttgtatcgcagatatagtttctctcttcatcactgtt
atggacaagctgagacttgagatcagagccatggatgagatccaaccagacctgagagag
ctgatggaaaccatgaataggatgagcaacatgcctccagactcagaggctaaggacaaa
gtgaatctctggttgtccactctcagcggtatgtctgcctcagatgaactggatgataat
caggttcggcagatgctcttcgatttggagtcggcctacaacgccttcaaccgattcctc
cactcctcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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