KEGG   Cyprinodon variegatus (sheepshead minnow): 107094928
Entry
107094928         CDS       T06110                                 
Name
(RefSeq) protein quaking-A isoform X1
  KO
K14945  protein quaking
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvg03041]
    107094928
Spliceosome [BR:cvg03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    107094928
SSDB
Motif
Pfam: STAR_dimer Quaking_NLS KH_1 KRR1-like_KH2
Other DBs
NCBI-GeneID: 107094928
NCBI-ProteinID: XP_015246327
Ensembl: ENSCVAG00000012707
Position
Unknown
AA seq 392 aa
MMVGEVEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRVRKDMYSD
SVNGLVDKHPLELPEPIGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGC
KIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKMRRAVEEVKKLL
VPAAEGEDNLKKMQLMELAILNGTYRDNNVKTPPLAFSLAAAAAAAQGPRLIAAPAGQVL
QPPTLRPPTPGGAPIMNLIRPTQMAAMLPNGTPTLVPPTPDGGLIYTTPYDYPYALAPTS
LLEYPIEHSGVLGKRAWGSLGTAANFSQPGQEGSFFYPGIGLLDAASMSHNQDLLKGAMA
TKVRRHDTRVHPYQRIVTADRGQFSLLATLCY
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgatggtcggagaggtcgaagtgaaggagcgaccgaggccgagtccagactatttgatg
caattattaaacgaaaagaagcttatgaccagtttgccaaatctctgcggaatcttcacg
cacctggagcggcttctggatgaagagatcaacagagtgcgtaaagatatgtacagcgac
tcagtgaacggccttgtggacaaacacccgctggagctgcctgaacccatcggacccatc
gttcacctgcaggagaaactgtttgtgcctgtcaaagagtacccagactataactttgtg
ggaagaatccttggtccccggggactcactgccaaacagctggaagcagagacgggatgc
aaaatcatggtgcgaggaaagagctccatgagagacaagaagaaggaggagcagaacaga
gggaagccaaactgggaacacctaaatgaagaccttcacgtcctaatcacagttgaagac
tcacagaacagagctgagatcaagatgagaagagcggtagaggaagtcaagaagctcctt
gtacctgctgctgagggggaagacaatttgaagaagatgcagctgatggagctggctata
ctcaacgggacgtacagagacaacaacgtcaaaacacccccccttgcgttctctcttgca
gcagcggcagcggccgctcagggccctcgcctcatagcagcccccgcaggtcaggtgttg
cagccaccgacactccggcccccgacgccgggcggggcacccatcatgaacctcataagg
cccactcagatggctgccatgctgcccaatggcacccccaccttggtgcctcccacaccg
gacggcggactaatctacaccaccccttacgactacccctacgccttggcacccacctcg
ttgctggagtaccccatcgagcacagtggggttctaggtaagagagcctggggaagcttg
ggtacagcggccaactttagccagcccggacaggagggcagctttttttaccccggcatc
gggttactggacgcagcttccatgagccacaatcaggacttgttgaaaggtgcaatggct
actaaagtgagacggcatgacacgcgggtccatccttaccaaaggattgtgaccgctgac
agaggtcagtttagtctcctagctactctttgctattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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