KEGG   Cyprinodon variegatus (sheepshead minnow): 107097924
Entry
107097924         CDS       T06110                                 
Symbol
usp1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
  KO
K11832  ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    107097924 (usp1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cvg01002]
    107097924 (usp1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvg04121]
    107097924 (usp1)
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107097924 (usp1)
Enzymes [BR:cvg01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     107097924 (usp1)
Peptidases and inhibitors [BR:cvg01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   107097924 (usp1)
Ubiquitin system [BR:cvg04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    107097924 (usp1)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     107097924 (usp1)
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 107097924
NCBI-ProteinID: XP_015250768
Ensembl: ENSCVAG00000005956
UniProt: A0A3Q2FJM4
Position
Unknown
AA seq 808 aa
MSGLLTENTGAGQASPVKRNKLSLKFFQKKETKRALDFSEAQTEEDKTEEQADSVASCEQ
VVYGPAPCPSSPGLAIAIPHEKKENLVPFVGLNNLGNTCYLNSILQVLYYCPGFREGVKK
LYDLSKSRERAKDENDKDEKPQRQQSECASGTLPANIELLGSFNSLITSIEQLQSSFLLN
PEGFSDGELATPPRKILHTIRQLNPMYEGYLQHDAQEVLQCILGYIQEACDTIRKEQELE
KDDGDVKTQNSSPSDFSCSGTQSKASADEDGQVSGKRKSDTEVGNAKKKPKSAKSKKSES
AEEDLSRNKHFTRSKRKSSSETLMESAQSKDGEEEKAKNLNEEEGNEGGKVDKAATKETR
GKRKIKATLGWLRSSGKQPSIFSKFCSVGKISSTAVKNLIKSEQENGPSEEPKERSAPQS
ASVTSAEGKTEKRQDALGLMEKLFQGRLVLRTRCLECESFTERREDFQDISVPVLDDQPS
SPEDLSEVSPDPKPEMKTLTWAISQFASVERIVGEDKYFCETCHHYTEAERSLLFDKTPE
VITIHLKRFSTSSLELDPYAGLSKVNTPLQTPLTLSLKEWCTKPSAAMQQQYDLFAVVMH
SGVTISSGHYTTYIRMSDLKEAKVWQQDDKEREMEEEVKENKGGVLKEENLAYDDGEVSV
SLSTRGQTRAGLANTKSGSKNLSEGSVGLLGGQRSLSNCELGSGRKAGSSGATEGSKRRR
TLNSSSQNTDGLKKEAEEAPVAPSGGREATEQQALSGLLQYEGKWLLFDDSEVRLFDEED
FLRACSPETCSSSTPYLLFYKRIPEPSQ
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgtcaggtctactgacggagaacaccggagcagggcaggcgagtccagtaaagaggaac
aaactctccttaaagttcttccagaagaaagaaacgaaacgagctctggatttctctgaa
gctcaaacagaagaagacaaaacagaagaacaagcggattcagtggcaagctgtgagcag
gtggtctatggccccgccccctgtccatcttcaccgggactcgctatcgctatcccacat
gagaagaaagagaacttggtgccttttgttggtcttaacaaccttggcaacacctgctac
ttaaacagcatcttgcaggttctatattactgtcctgggttcagagaaggtgttaagaag
ttgtatgacctttccaaaagcagagagagagcgaaggatgaaaatgataaagatgaaaag
cctcagcgtcagcagtcagagtgtgcatctgggaccctgccagctaacatcgagctcctc
ggaagcttcaacagcctcataacttcaatcgagcagctgcagtccagcttcctgctcaac
cctgaaggcttcagcgacggagagctggccaccccgcctcgtaaaatacttcacaccatt
aggcagctgaaccctatgtatgaaggctatctccagcatgatgctcaggaggtcctgcag
tgcattctgggatatattcaggaggcctgcgacaccatcagaaaggagcaggagctggaa
aaggacgacggagatgtgaaaacacagaacagtagtccatcggatttcagttgctctggg
acacagtcaaaagcctctgcagatgaggacggacaagtcagcgggaagaggaagagtgac
acagaggtgggaaatgctaagaagaagccgaagtctgccaagtccaagaaatctgagtct
gcagaggaagacctcagtagaaacaaacacttcactcgctccaagaggaagtcctccagt
gagactctcatggaaagcgctcagagtaaagatggagaggaggagaaggcaaaaaacctg
aatgaggaggaagggaacgaaggagggaaggttgacaaagcagcaactaaggagacgcgt
ggaaaaaggaagattaaagccacactaggttggctgagatcgtcagggaagcagccaagt
attttttctaagttctgcagcgttgggaagatcagctccacagcggtaaaaaatctgatc
aaatcagagcaggaaaacgggccatcagaagagccaaaggagaggagcgctccccaatct
gcttctgtaacttctgctgaagggaaaacagagaaacgtcaagacgccctgggcttgatg
gagaagctgttccagggccgactggtgctgcgaactcgctgtctagagtgtgagagcttc
acggagcggagagaggacttccaggacatcagcgttcccgtgcttgatgaccaacccagc
agcccagaagacctctctgaagtctctccagaccctaaacctgagatgaagactctgacg
tgggccatctctcagtttgcctcggtggagcgcatcgtaggggaagataaatacttctgt
gaaacctgccatcattacacagaggctgagaggagtctgctgtttgataaaacccctgaa
gtcatcactattcacctgaagcgcttctccaccagcagcctagagttggatccatacgca
ggcctgtctaaagtgaacacccccttacagacaccgctgacgctgtctctgaaggagtgg
tgtacgaagccctctgcagccatgcagcagcagtacgacctgtttgctgtggtcatgcac
agcggcgtcaccatcagcagcggccactacaccacctacatccgcatgtctgatctgaaa
gaagcaaaggtctggcaacaggacgataaagagagagaaatggaggaggaggtgaaggaa
aataaagggggtgtactgaaagaggaaaatctggcctatgacgatggagaagtgtcagtc
agcctaagcaccagagggcagactcgagcaggtttggctaacactaaatcggggagcaaa
aacctttcagaaggtagtgttggactcctgggaggacagaggagtttgtccaattgcgag
ctgggaagcgggagaaaagcaggcagctctggagccacagagggatcgaaacgtaggagg
actttaaacagctccagccagaatacggacggattaaaaaaggaagcagaggaggcacca
gtggctccctctggaggcagggaggctacagagcagcaggctttgagcggcctgctgcag
tatgaggggaaatggctgctgtttgatgactcagaggtgcgtttatttgacgaggaggac
tttctgcgagcctgctcccccgagacgtgttcctcatcgacaccataccttctgttctac
aaaaggattcctgagcccagtcaataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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