KEGG   Cyprinodon variegatus (sheepshead minnow): 107098878
Entry
107098878         CDS       T06110                                 
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like
  KO
K09191  general transcription factor IIIA
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cvg03000]
    107098878
   03021 Transcription machinery [BR:cvg03021]
    107098878
Transcription factors [BR:cvg03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    107098878
Transcription machinery [BR:cvg03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIA
     107098878
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_jaz zf-met zf-Di19 zf-C2H2_2 zf-Sec23_Sec24 zf-BED BolA C1_4 zf-CHY Elf1 zf-C2H2_11 STL11_N HNH_5 DUF2180 zf-C2H2_6 zf-C2H2_12
Other DBs
NCBI-GeneID: 107098878
NCBI-ProteinID: XP_015252232
Position
Unknown
AA seq 204 aa
THTGEKPFSCNICTKKFTQKSHLTSHIRTHTGEKPFSCNICTKKFTQKSHLTSHMRIHTG
EKPFSCNICHKKFTVNSSLTTHKRIHTGEKPFECLSCGKSFTEKSTLDQHIRIHSGEKPF
SCTICHKTFTVKSNLTSHMRIHTGRKPFVCLFCGKSFTKKATLDQHIRIHTGEKPFSCTI
CNKNFTVKSHLTSHMRIHTGDKPL
NT seq 616 nt   +upstreamnt  +downstreamnt
aactcacacaggtgagaagcctttttcctgtaacatttgtaccaagaagtttactcaaaa
gagtcatttgacttctcatataagaactcacacaggtgagaagcctttttcctgtaacat
ttgtaccaagaagtttactcaaaagagtcatttgacttctcatatgagaattcacacagg
tgagaagcctttttcctgtaacatttgtcacaagaagtttactgtaaatagtagtttgac
tactcacaagagaattcatactggtgagaaaccttttgaatgtctgtcctgtggaaaaag
ctttactgagaaatctactcttgatcaacacatcagaattcactcaggtgaaaagccttt
ttcctgtactatttgtcacaagacctttaccgtaaagagtaatttgacttctcatatgag
aattcacacaggtaggaaaccttttgtttgtctgttctgcggaaaaagcttcactaagaa
agctactcttgatcaacacatcagaattcacacaggtgaaaagcctttttcctgtactat
ttgtaacaagaattttactgtaaagagtcatttgacttctcatatgagaattcacactgg
tgataagcctttgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (28)   

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