KEGG   Cyprinodon variegatus (sheepshead minnow): 107099188
Entry
107099188         CDS       T06110                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like isoform X1
  KO
K11583  serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03015  mRNA surveillance pathway
cvg04261  Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107099188
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    107099188
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cvg01009]
    107099188
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107099188
   03036 Chromosome and associated proteins [BR:cvg03036]
    107099188
Protein phosphatases and associated proteins [BR:cvg01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     107099188
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     107099188
Chromosome and associated proteins [BR:cvg03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     107099188
SSDB
Motif
Pfam: EF-hand_13 P2R3B_EF-hand EF-hand_7 EF-hand_6 EF-hand_1 EF-hand_5
Other DBs
NCBI-GeneID: 107099188
NCBI-ProteinID: XP_015252703
Ensembl: ENSCVAG00000023280
UniProt: A0A3Q2G7W6
Position
Unknown
AA seq 581 aa
MPSPQVLQPVLKLKVDELFFNWLSDPGTQSALKYGLDLIKSGQYNSLGSGRAQDKRSLSF
NENNNVASQKNLTEKKPAPLGASSSPSPNSTLPSRSSSNARITGPNGRQLRRSVSTKKAQ
VRTTEPVTTALSESIPKFYFPQGRPQANLNIDGLISKIEKIFSQFPNERATIEDMGLVAK
ACECPLYWKMPLFCSAGGDRTGFVSVHKFVAMWRKTLQTCHDDASKFVHLLAKPGCNYLE
QDDFIPFLQDVVNSHAGLAFLKEAPDFHSRYITTVIQRIFYNVNRSWTGKISCSELRKSN
FLQNVALLEQEEDVNQLTEFFSYEHFYVIYCKFWELDTDHDLYIDQRDLMRHNDQAISQK
MIERIFSGTVTRDRRVFKEGRLSYSDFVWFLISEEDKKTDTSIEYWFRCMDLDGDGVLSM
YELEYFYEDQCQKLEAMAIEPLPFEDCLCQMLDLVKPEVEGKITLRDLKKCKLAHIFYDT
FFNIEKYLDHEQRDPFSVIREAETDGQEVSDWEKYAADEYDILVAEDAANDHCNDVYDNP
LSPLGQHISSELGLTKKHFFEIPTPHCNLDMEEYEYEDDFE
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgccgtccccacaagtcctccaaccggttcttaaattaaaggttgacgagctgtttttc
aactggttgagtgatcctgggacacagtccgccctcaaatatggccttgatctaattaaa
agcggacagtataacagcttgggtagtgggagagcacaggacaaaaggtcgttgagtttt
aacgagaacaacaacgttgcatcgcagaagaaccttacagagaagaaacctgctccactt
ggtgcctcttcaagcccctcgcctaacagcaccctgccttctcgcagtagcagcaatgca
cgaataacaggacccaatggaagacaactacggaggtctgtcagcaccaaaaaggcccag
gtgaggacgacggagccggtaaccaccgcactgagtgaaagcattcccaagttttacttc
ccacagggccggccccaagccaacctcaacatcgacggcctcatttccaaaattgagaaa
atattttcacaattcccaaatgaaagggccaccattgaagacatggggctggtagccaag
gcttgtgagtgtcccctctactggaaaatgccattgttctgctcagctggaggcgacagg
acgggtttcgtctctgtacacaagtttgtggctatgtggagaaaaacgctgcagacctgt
cacgatgatgcttctaaatttgtgcacctcttggccaagcctggttgtaattacctggaa
caagacgactttattccattccttcaggatgtagtgaactcacatgcaggcctggccttt
ctaaaagaagcgccagacttccactcgcgatatatcaccacagtaattcagaggatattt
tacaatgtgaaccggtcatggactggaaaaataagctgctctgaactcaggaaaagtaat
tttcttcagaatgtggcgttgctggagcaggaggaagatgtgaaccagctgacagaattc
ttctcctatgagcatttttatgtgatctactgcaagttctgggagctggacaccgatcat
gacctctacatcgaccagagagacctgatgcggcacaatgaccaagccatttctcagaaa
atgattgaaaggatcttctcaggaacagttacaagagacaggcgggtgtttaaggaggga
aggctaagttactcggactttgtttggttcctcatctctgaggaagacaagaagaccgac
accagcatagagtactggttccgctgtatggacctggatggggacggggtgctcagcatg
tatgagctggagtacttctatgaggatcaatgtcagaaactggaggccatggctatcgaa
ccccttccattcgaggactgcctctgccaaatgctggacctcgtcaaacctgaggtggaa
ggtaagatcactctgcgggatctgaagaagtgcaagctggctcatatcttctatgacact
ttcttcaacattgagaagtacctggaccacgagcagcgggaccctttctctgtcattagg
gaggccgagacagacggccaggaagtgtcggactgggagaaatacgcagcggacgagtac
gacatcctggtggcggaggacgcagctaatgatcactgcaatgatgtgtatgataatcct
ctgagccctctggggcagcacatctccagtgagctgggtctgacaaagaagcacttcttt
gagatccccactccccactgcaacctggacatggaggaatatgaatatgaagacgacttt
gaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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