KEGG   Cyprinodon variegatus (sheepshead minnow): 107100283
Entry
107100283         CDS       T06110                                 
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
  KO
K10908  DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:cvg03029]
    107100283 (polrmt)
Enzymes [BR:cvg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107100283 (polrmt)
Mitochondrial biogenesis [BR:cvg03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial RNA polymerase
    107100283 (polrmt)
SSDB
Motif
Pfam: RNA_pol RPOL_N PPR_2 PPR_3
Other DBs
NCBI-GeneID: 107100283
NCBI-ProteinID: XP_015254198
Ensembl: ENSCVAG00000005949
UniProt: A0A3Q2CHH0
Position
Unknown
AA seq 1323 aa
MSLLRVCSTLGRSLGRRSLADARRCLAERCQLCVSVRSGTIRRISGTPWYLQRRNVSTVI
PKSEDVKKRVHEQSQLLDVLEARIQQLQSDVVLDVQHAKVQFVKAPSFEGGVSSGRTAKG
SSKDKKDISKSGQMVTKGASKSQPSRWMEKLSQEKKNKLKKQQDVQQKIVKEKLPGKSKG
SKSTLMPTGTTHKTISSAAKKSSGGAKLSDEMRAAVPSVAAVTATGSAKAAVTPKTFKQK
RKDSKNKGSDKEASKTTVPEHKDKDLAEVEELEKRLNQQVQHWTCLNSSDSFQESGACSS
NGDTQLSIRSYLEACVFVGDIERSQSFLLSQHRVMSRRKHLTTDVYNIMMRVWAKKGLLN
QIGRIFILLEEAGLKPNIGSYSAALECMGRSPNCSPKVISRCLNQMKEDGLSVDDLFSHC
VFRQDERDMLLKVIQTVKPDYEPNLSLDESQCASPLVQDFYTKREHHTYPKLDFTQEELQ
ERFKRQLIVEKACTVTIDSVESIKPVTENMAKMRKLLAEQRVEWQKVLLQALRESKMIMA
KTNTKDYKLNLYPYLLLLEDKEYVDIMIQSVTNLPPSGESLKILARDLGNRIYTKYCVRQ
KQQNQIVEKLGSIYSAYTDLLAKDTKVNDVLPREQWCKLEMEQLSGPTLQGGETSWPYIV
TLELGTFMVDIMVKNLKIHSDILNPAYDRKLIPILYHMYTFRSTRQVGFIKPHPILTQMQ
QEAMETTLTFDSSVMPMLCPPVPWTSVKFGAYLLTPAKLMRSVDGAMQHEQLLEKCPNLH
PVFDSLNQLGNCAWKINKPILDIIISIFNDRGSDKLDIPPPLSEAPKIPHFNAHDPAFTA
SEKAHMKREVINAKKKCSEMHSLRMDALYKLSIAHHMRDELFWFPHNMDFRGRTYPCPPY
FNHLGSDVTRAMLVFAEGKPLGPKGLDWLKIHLVNLTGLKKRSSLQGRLEYANSIMDDIL
DSADNPLNGRKWWMEADEPWQALGCCMEIANAVRSPDPTKFISHFPVHQDGSCNGLQHYA
ALGRDVIGATSVNLMPCEVPQDVYSGVAQQVEELRARDAAKGLKIAQVLEGFISRKVVKQ
TVMTVVYGVTRYGGRLQIEKRLKEIDEFPKDHVWDASHYLVRLVFSGLKEMFTGTREIQD
WLTESARLISKSGHTVEWVTPLGLPIVQPYHRTRSQVLKSTMQHINLQISHDAKERPDTV
KQKNAFPPNFIHSLDSTHMMLTSLYCYSAGLTFVSVHDCFWTHALTVDTMNKICREQFVA
LHSQPILQELSDFLLHKYCSTIQTEAKKKKYQEYRRLMLLLAKVPQTGDFDLQRVKESTY
FFS
NT seq 3972 nt   +upstreamnt  +downstreamnt
atgtctctcctcagagtttgctccactttaggaaggagccttggtcggcgcagtttagcg
gacgctcgcaggtgtttagcggagcgctgtcagctttgtgtgtcggtgagaagcggaaca
atcagacggatatcaggaacaccttggtacctacaaagaagaaatgtttcaaccgttatc
ccaaaatcagaggatgtaaagaaacgtgtacatgaacagtctcagttgttagatgtcctt
gaagccaggatccagcaacttcagtccgacgtcgttttagatgtccaacatgcaaaagtg
caatttgttaaagccccctcttttgaagggggtgtttcatccggaaggactgcaaaagga
tcctctaaggacaaaaaggacatttctaaatctggacagatggttacgaaaggggcctct
aagtctcagcccagtcgctggatggaaaaattatctcaggagaagaaaaataaacttaag
aaacagcaggacgtccagcaaaaaatcgttaaagagaagctcccagggaaatctaaaggt
agcaaaagcaccttaatgccaactggtacaacacacaaaacaatatcttctgcagcaaag
aagagcagtgggggcgccaagctgtcagatgaaatgcgtgccgcagtgccttcggtagct
gctgtcactgcgaccggctcagcaaaagcagctgtgacacctaaaacatttaagcagaaa
cggaaagactcaaaaaataagggctctgataaagaagcttcaaaaacgactgtcccagag
cacaaagacaaagaccttgctgaggttgaggagcttgaaaaaagactcaaccagcaagta
caacattggacgtgtttgaatagctcagacagcttccaagagagcggcgcgtgcagctca
aatggggacacccagctcagcatccgctcctacctggaggcatgtgtgtttgtaggggat
attgaacgctcgcagagtttcctgctcagtcagcacagagttatgagtcgacgtaaacat
ctgaccacagatgtttacaacattatgatgagagtctgggccaaaaagggcctgttgaat
cagatcggccgcatcttcatactgttggaagaagctggtctgaagccaaacatcggctcc
tactctgctgcactggagtgcatgggtcgcagtccaaactgctccccaaaagtgatttca
aggtgtctgaatcaaatgaaggaggacggcctgtctgtggatgacctgttcagccattgt
gttttccgacaagatgaaagggacatgctgctgaaggtgattcaaacggtgaaaccagac
tacgagcccaacctcagcttggatgaaagccagtgtgcctcgccgctggtgcaagacttc
tacacaaagagagagcaccacacttaccccaagctggacttcacccaggaggagctccag
gaacgttttaaacgtcagctcattgtagagaaggcctgcactgtcaccattgactccgtt
gagtccatcaaacctgtcactgaaaacatggccaaaatgaggaaactgctggccgaacag
cgggtagagtggcagaaggtcctcctccaggcgctgagggaaagcaagatgatcatggcc
aaaaccaacaccaaggactacaagcttaacctttatccatatctgctgctgctggaggat
aaggagtatgttgacattatgatacagagtgttaccaacttgcctcctagtggagagtca
cttaagattttagctcgagatctgggcaacaggatctacaccaagtactgtgtgagacag
aagcagcagaatcagattgtagaaaagctgggaagcatctatagtgcctacacagatctg
ctggccaaagataccaaggtgaacgatgtccttccaagggaacagtggtgtaagctggag
atggaacagctttcaggacccacgctgcaggggggtgagaccagctggccgtacattgta
actctggagctgggcaccttcatggtggacataatggtgaagaaccttaaaatccacagt
gatattctgaaccctgcctacgacagaaagctcatccccatcctctaccacatgtatacc
ttccgcagcaccagacaggttggcttcatcaagccccaccccatcttgacacagatgcaa
caggaagccatggagaccacgctgacctttgactcgtccgtgatgccgatgctgtgccct
ccggtgccgtggacgtcagtgaagttcggagcctacctcctcacccccgccaagctgatg
cgttcagtagatggggccatgcagcatgagcaactgctggagaagtgtccgaatcttcac
cctgtttttgactcgctcaaccagctgggtaactgtgcctggaagatcaacaaaccaatc
ctggacatcatcatctccatcttcaacgatcgggggagcgataagctggacatccctcca
cctctctcagaagcccctaaaataccccattttaacgctcatgaccctgctttcacagcc
agtgagaaagcccacatgaaacgagaggtgatcaatgccaagaagaagtgcagcgagatg
cacagcctgcgaatggatgccctttataaactctccattgcgcaccacatgcgggatgag
ctgttctggtttccccacaacatggacttcaggggacgaacgtacccttgtcctccatac
tttaaccacctaggaagtgatgtcacccgggcgatgctcgtgttcgctgaggggaagcct
ctgggtcctaagggtctggactggctaaagattcacttggttaacttgacagggttgaag
aagagaagctctctacaaggacgtctggaatacgctaatagcatcatggacgacattctg
gactcggcagacaaccctctcaatggcagaaaatggtggatggaagccgatgaaccttgg
caggcgctaggctgctgcatggagatagcaaacgcagtgaggtcacccgatccaacaaag
ttcatctcccactttcctgttcaccaggatggttcctgcaacggtctccaacactatgca
gctcttggcagagatgttattggtgcaacttcagtgaacctcatgccctgcgaggtgccc
caggatgtgtacagtggtgtagcgcagcaggtggaagagttgcgagctcgggatgcagca
aagggcctgaagattgctcaggttctggagggtttcatcagccggaaagtggtcaaacag
actgtgatgacagtggtgtacggagtcacacggtatgggggccgcctgcagatagagaag
aggctaaaggagattgatgagtttcccaaggaccatgtgtgggatgcatcccattacctt
gtgcgcctggtgttcagtggtctaaaggagatgtttacaggaactagagagattcaggac
tggctcacagaaagtgccaggctcatctccaagtctggccacactgtggagtgggtgaca
cccctgggtttaccgatcgttcagccttaccaccgcacacgcagccaagtgctgaagagt
acaatgcaacacataaacctccaaatcagccatgatgccaaagagagacctgacacagtt
aaacagaagaatgcattccctcctaacttcatccactccctggactccacacatatgatg
ctgacttcactctactgctacagtgccggcctgacattcgtctcagttcacgactgtttc
tggacccacgccctcactgtggacaccatgaacaagatctgccgggagcagttcgttgcc
ctccacagccagccgattctccaagagctgtccgactttctgctgcacaaatactgctcc
acaatccagacagaagctaagaagaagaagtatcaggaatacaggaggctgatgttgctt
ctggccaaagtgccccagacaggtgattttgatctccaacgggtgaaagagtccacttac
ttctttagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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