KEGG   Cyprinodon variegatus (sheepshead minnow): 107102020
Entry
107102020         CDS       T06110                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107102020 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107102020 (rae1)
   03036 Chromosome and associated proteins [BR:cvg03036]
    107102020 (rae1)
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107102020 (rae1)
Chromosome and associated proteins [BR:cvg03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    107102020 (rae1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Exonuc_X-T_C
Other DBs
NCBI-GeneID: 107102020
NCBI-ProteinID: XP_015256640
Ensembl: ENSCVAG00000005499
Position
Unknown
AA seq 369 aa
MSLFGTTSGFGTGGTGVFGSTTADSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIAG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHEGPIKSIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttgtttggaacaacctccggttttggaacaggggggacaggtgtttttggaagc
accacagctgacagtcataatcccatgaaggatgtggaagtgacctctcctccagatgac
agcattagctgcttggctttcagtcctccaaccatgccaggaaactttcttattgcagga
tcctgggcaaatgatgtccgatgttgggaggtgcaggacaacggacagaccgtccctaaa
gcccagcagatgcacacaggtccggtgctggatgtctgctggagcgatgatggaagtaaa
gtgttcactgcttcgtgtgacaagacggctaagatgtgggatctgaacagcaatcaagca
atgcagattgcacagcatgaaggtcccattaaatcaatccactggataaaagctccaaac
tacagctgtgtgatgactggcagctgggataaaactctgaagttttgggacacccgctct
cccaaccccatgatgtccctgcagatgcctgagagatgctactgcgccgatgttgtgtac
cccatggcagtggtagccacagctgaaagaggccttatagtgtaccagttagagaaccaa
ccctctgagtttcgcagaatagactcccctctcaaacatcagcaccgctgtgttgccata
tttaaggacaagcagaacaagccaacaggttttgcactgggaagcattgagggcagagtg
gcgatccactacatcaatcccccaaacccagccaaagataacttcaccttcaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatttatgctgtcaatgccatctcc
ttccatcctgtgcatggcacattggccactgtgggctcagacggacgcttcagcttctgg
gacaaagacgcccgcaccaagctgaagacctccgagcagcttgaccagcccatcacggct
tgctgcttcaacaacaatggcaacatctttgcatacgcttcaagctacgactggtcaaag
ggccatgagtactacaacccccagaaaaagaactacatctttctgaggaacgctgctgaa
gagctgaagcctcggaacaagaaatggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system