KEGG   Cyprinodon variegatus (sheepshead minnow): 107103158
Entry
107103158         CDS       T06110                                 
Symbol
dus3l
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cvg03016]
    107103158 (dus3l)
Enzymes [BR:cvg01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     107103158 (dus3l)
Transfer RNA biogenesis [BR:cvg03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    107103158 (dus3l)
SSDB
Motif
Pfam: Dus zf-CCCH_4 zf-CCCH zf-CCCH_2 FMN_dh
Other DBs
NCBI-GeneID: 107103158
NCBI-ProteinID: XP_015258191
Ensembl: ENSCVAG00000007874
Position
Unknown
AA seq 612 aa
MEASVEDTTERATNAAVKGEASIKQEFITTKDKFHGFLDSEWQNSKGEKASENCTPLEKK
EDPSVEEEPESKKPKLDPEDAKKTEKMDKKKFRGQNKSRPHKKPTSYEEKRLCMSVIQNQ
AACKFGDKCIFYHDVAEYMASKPADIGERCHLYDTFGKCEYGLACRFAKAHTTADFKTME
KADLVKAYEGRTMMKNSLSKDLQYRLRKRSVTFEKSEEYLKTLCNNRDKKEQQGNGDLCT
AEVSTNPTEDKQDVSTEELLPTSPDSQPPVKTIGPLTDADVIKLRSCEKKKVDFRDKLYL
APLTTCGNLPFRRVCKRFGADITCGEMAMCTNLLQGHQSEWALLKRHESEDLFGVQVEGC
FPDTMTRCAELINTYTDVDFVDINSGCPIDLVYKKGGGCGLMTRTRKFEHIIKGMNYVLD
VPLTVKIRTGVQEKSNIAHKLIGEMKNWGVSMITLHGRSREQRYTKLADWDYISTCAKVA
SPVPLFGNGDILSYEDAMKARETGVSGIMIARGALIKPWIFTEIKESRHWDISSSERLDI
LKDFTNFGLEHWGSDTQGVEKTRNFLLEWLSFMCRYIPVGLLERVPQKINERPPYYMGRN
YLESLMASQHVL
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggaggcgtcagtggaggacacaacagagagagcaacaaatgctgctgtaaagggagaa
gcttccatcaaacaagaatttatcaccaccaaagataaatttcatggctttctggattca
gaatggcagaactccaaaggagagaaggccagtgaaaactgcacccctctggagaaaaaa
gaagatccctctgtggaagaagaacctgaatctaaaaaacccaagctggaccctgaagat
gcaaagaaaacagagaaaatggataagaaaaaatttcggggacagaacaagtcaaggccg
cacaaaaagcccactagttatgaagaaaagcgactgtgtatgtcagtcattcagaaccaa
gctgcgtgcaagtttggcgacaagtgcattttttaccacgatgtggcagagtacatggcc
tctaagcccgctgacatcggggagcgctgtcacctctacgacacatttggaaaatgcgaa
tacgggctcgcctgtcgcttcgctaaggcccacactactgctgacttcaaaaccatggag
aaggcagacctggttaaagcttacgaaggcagaactatgatgaagaacagcttgagtaaa
gacctgcagtatcgcctgaggaagcgctcagtcactttcgaaaagtcagaggagtacctg
aaaacgctttgtaacaacagagataagaaggaacagcaagggaacggtgatctttgcaca
gctgaggtatctacaaacccaacagaagacaagcaggatgtttctactgaagaactgctc
cccaccagcccagacagccagcctccagtgaaaactattggcccactaacagatgccgat
gttatcaaactgcgatcctgtgaaaagaaaaaggttgacttccgggacaagctctatctc
gctcctctaacaacatgcgggaacctgcctttccgtcgcgtgtgcaaacgctttggagca
gacatcacctgtggggagatggccatgtgcacaaacctgctgcaggggcatcagtcagag
tgggccctcctgaagaggcatgagagtgaagatctgtttggtgttcaggtcgaaggctgt
tttccagataccatgacgaggtgtgctgagctcatcaacacctacactgatgttgatttt
gtggatatcaactctggatgccccattgatcttgtttataagaagggtggaggatgtggc
ttgatgaccagaaccagaaaatttgaacatatcattaagggaatgaattatgtccttgat
gtcccgctaacagtgaagatccgcactggtgtgcaggagaagtccaacattgcgcacaaa
cttataggagagatgaagaattggggtgtctccatgatcacgctgcatggcagatccagg
gaacagcgctacacaaagttagctgactgggactatatcagcacatgtgctaaggtggcc
agtcctgttccattatttggtaatggagacattctgtcttatgaggatgccatgaaagca
cgagagaccggtgtttctggtatcatgattgcaaggggggccctcatcaagccttggatt
ttcacagagataaaggagagccggcactgggacatatcatccagtgagcgacttgatatc
ctgaaggatttcaccaactttggcctggaacactggggttctgacactcagggtgtggaa
aagacccggaacttcctgctggagtggctctcctttatgtgcagatatattcccgtgggc
ctgttggagcgagtgcctcagaagataaacgagaggcctccatattacatgggcaggaac
tacttggagtccctgatggcaagtcagcatgtgttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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