KEGG   Cyprinodon variegatus (sheepshead minnow): 107103870
Entry
107103870         CDS       T06110                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010  MAPK signaling pathway
cvg04137  Mitophagy - animal
cvg04141  Protein processing in endoplasmic reticulum
cvg04210  Apoptosis
cvg04217  Necroptosis
cvg04621  NOD-like receptor signaling pathway
cvg04622  RIG-I-like receptor signaling pathway
cvg04920  Adipocytokine signaling pathway
cvg05132  Salmonella infection
cvg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107103870
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    107103870
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    107103870
  09143 Cell growth and death
   04210 Apoptosis
    107103870
   04217 Necroptosis
    107103870
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    107103870
   04622 RIG-I-like receptor signaling pathway
    107103870
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    107103870
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107103870
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    107103870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107103870
   04121 Ubiquitin system [BR:cvg04121]
    107103870
Enzymes [BR:cvg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107103870
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     107103870
Ubiquitin system [BR:cvg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    107103870
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF Sina_ZnF MATH zf-TRAF_2 TRAFD1-XIAF1_ZnF zf_C2HC_14 FYVE
Other DBs
NCBI-GeneID: 107103870
NCBI-ProteinID: XP_015259199
Ensembl: ENSCVAG00000003458
Position
Unknown
AA seq 454 aa
PADDVDLQANHEGSCDFIIIMCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKN
IKAHDEICPKYPMICEGCAKKKIPREKYVDHIKFCSKFKTPCRFHVVGCDTSVEKEKIHD
HEQQCSYEHLNLLLHFIMGIKVSLESLQPQILELASQKLQVLHQSLRELEMKMSQLSGGG
PAPMQGACALTLATSFTPLPSAMGAALELQLQSEKTKVAELSRRCQELELKVNTFENIVC
VLNREIERSCATMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEMEGKMREMSA
ATYDGIFIWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHL
SLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDVSSSSFQRPVSDMNIAS
GCPLFCPLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq 1367 nt   +upstreamnt  +downstreamnt
aacctgccgatgatgttgacctgcaggccaaccatgagggcagctgtgacttcatcatca
tcatgtgtccgtcatgtaaggagctgatgagggccaatgaacaggagcgccacaatgaga
gggagtgtccagagaggacgctgaactgcaaatactgcaaagaaccgttcctgctgaaga
acatcaaggctcacgatgaaatctgtcccaagtacccgatgatttgcgagggctgtgcca
agaaaaagattcctcgtgaaaagtatgtggaccatattaagttctgcagtaaatttaaaa
cgccgtgcagatttcatgttgttggctgcgatacgtctgtggaaaaggagaagatccatg
accatgagcagcagtgttcctatgaacacctcaacctgttactgcatttcatcatgggga
tcaaagtgagtctggaaagcctacaacctcagatcctggagctggcaagccagaagttgc
aggtgctccaccagtccctcagagagctggagatgaagatgagccaactcagcggtggcg
gccccgcccccatgcagggtgcatgcgctctcaccctggccacatcctttaccccacttc
ccagcgccatgggggccgccctggagctacagttgcagagcgaaaagaccaaagtggcgg
agctgagccgacgttgccaagagctggagctgaaggtaaacacatttgagaacatcgtct
gcgtcctgaaccgagagatcgagcgctcctgtgccaccatggaggcctacaaccgccagc
acagactggaccaggacaagatagagattttaaacaacaaggtccgtcagctggagagga
cagtaagcctgagggacctgtccatcgtggagatggaggggaagatgagggagatgtctg
cagctacctacgatggcatctttatctggaagatctctgatttcaccaagaagaggcagg
acgccgtggcgggccgtgctcctgccatgttctctcctgcgttttatacgagtaaatacg
gctataagatgtgtttacggatctacctgaacggcgacggaacaggccgggggacgcacc
tgtctctgttctttgtggtgatgagaggacacagcgacgctctccttaagtggcctttca
accaaaaggtgactctcatgctgctggaccagaacaaccgggaacacataatcgatgctt
tccggcccgacgtctcgtcctcgtccttccagagacccgtcagtgacatgaacatcgcca
gcggctgtccactcttctgtcctctgtccaagctggactctaaaaactcctatatacgtg
atgacaccatctttattaaggccatcgtagacctcactgggctctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (10)   
   KEGG PATHWAY (10)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (31)   

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