KEGG   Chromobacterium violaceum: CV_0205
Entry
CV_0205           CDS       T00147                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cvi  Chromobacterium violaceum
Pathway
cvi03420  Nucleotide excision repair
cvi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CV_0205 (uvrD)
   03430 Mismatch repair
    CV_0205 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvi03400]
    CV_0205 (uvrD)
Enzymes [BR:cvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CV_0205 (uvrD)
DNA repair and recombination proteins [BR:cvi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CV_0205 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     CV_0205 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_12 Viral_helicase1 AAA_30
Other DBs
NCBI-ProteinID: AAQ57884
LNCC_Brazil: CV0205
UniProt: Q7P1K8
Position
215313..217454
AA seq 713 aa
MSDLLAGLNPEQLRAVTWPAKSALVLAGAGSGKTRVLTTRIAWLLSTGQTSPAGVLAVTF
TNKAAREMQTRLSALVPVNVRNMWIGTFHGLCNRFLRIHYRDAGLPQTFQILDSADQQAA
IKRLLKSLELSDEKYPPRAVQSFINGNKEAGLRAESLPPALNPYEAKLVELYAAYDAQCR
REGVVDFAELLLRSYELLSRNEALRAHYSSRFSHILVDEFQDTNRLQYAWLKLLAGEHGA
LFAVGDDDQSIYAFRGAEVGNMRALLSDFHVAEPVRLEQNYRSMGNILNAANALIEQNDG
RLGKNLWTDAGEGDKIRFFQAGSDGEEAEFIVDEAKSLHRDGLALSDIAVLYRSNAQSRL
LEHVLVNAQIPYRIYGGLRFFERQEIKHALAYLRLVANPDDDNALLRVINVPARGIGARS
VENLQAASREQGVTLWQAACQSGGGRTAAKIGEFVLLIEKLREQCRDFNLAETISLVIDR
SGLRDMYEQDKKDGEERLANLDELVNAAASFLPDQPEQALTEFLAAASLEAGEHQADAGS
DALQLMTVHAAKGLEFDAVFVSGLEEGLFPHENSVMDGKGLQEERRLMYVAITRARKRLY
LSSAQSRMLHGQSRYPIPSRFIDEIPAELIHSLSATVKAPVAPQQARRAAAAPRRQAENA
YGLSIGQAVSHAKFGIGVVIDAEGNGEDVRLQINFAEHGVKWLDLRYAKLTPA
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgagcgatctgttagccggcctgaaccccgaacaactgcgcgccgtcacctggcccgcc
aagagcgcgctggtgctggccggcgccggcagcggcaagacccgggtgctgaccacccgc
atcgcctggctgttgtccaccggacagacctctccggccggcgtgctggcggtgaccttc
accaacaaggcggcgcgcgagatgcagacccggctgtcggcgctggtgccggtcaacgtc
cgcaatatgtggataggcaccttccacggcctgtgcaaccgcttcctgcgcatccactac
cgcgacgccggcctgccgcaaaccttccagatcctggactccgccgaccagcaggccgcg
atcaagcgcctgctgaaaagcctggagctgtcggacgagaaatacccgccgcgcgcagtg
cagtccttcatcaacggcaacaaggaagccggcctgcgcgccgaatcgctgccgccggcg
ctgaacccgtacgaggccaagctggtggagctgtacgccgcctacgacgcccagtgccgg
cgcgagggcgtggtggacttcgccgagctgctgctcagaagctacgagctgttgtcgcgc
aacgaggcgctgcgcgcccattacagcagccgcttttcccacatcctggtggatgagttc
caggacaccaaccgcctgcaatacgcgtggctgaagctgctggccggcgagcacggcgcg
ctgttcgcggtcggcgacgacgaccagagcatctacgccttccgcggcgccgaggtcggc
aatatgcgcgcgctgctgtccgacttccacgtggccgagccggtgcgcctggagcagaac
taccgctcgatgggcaacatcctcaacgccgccaacgcgctgatcgaacagaacgacggc
cggctgggcaagaacctgtggaccgatgccggcgagggcgacaagatccgcttcttccag
gccggcagcgacggcgaggaggccgagttcatcgtcgacgaggcgaagagcctgcaccgc
gacggcctggcgctgtccgacatcgccgtgctctaccgctccaacgcccagtcgcggctg
ctggagcacgtgctggtcaacgcccagatcccctaccgcatctacggcggcctgcgcttc
ttcgaacgccaggagatcaagcacgcgctggcctatctcaggctagtggccaacccggac
gacgacaacgcgctgctcagggtgatcaacgtgccggcgcgcggcatcggcgcgcgcagc
gtggaaaacctgcaggccgccagccgcgagcagggcgtcacgctgtggcaggcggcctgc
cagagcggcggcggccgcaccgccgccaagatcggcgagttcgtgctgctgatcgaaaaa
ctgcgcgagcagtgccgcgacttcaacctggccgagaccatcagcctggtgatagaccgc
agcggcctgcgcgacatgtacgagcaggacaagaaggacggcgaggagcgcctggccaac
ctggacgagctggtcaacgccgccgccagcttcctgcccgaccagccggaacaggcgctg
accgagttcctggccgccgccagcctggaagccggcgagcaccaggccgacgccggcagc
gacgcgctgcagctgatgacggtgcacgcggccaagggcctggaattcgacgcggtgttc
gtcagcggcctggaagaaggcctgttcccgcacgagaacagcgtgatggacggcaagggc
ctgcaggaagagcgccggctgatgtacgtggccatcacccgcgcccgcaagcggctgtac
ctcagcagcgcgcagagccggatgctgcacggccagagccgctaccccatcccgtcgcgc
ttcatcgacgagatcccggccgaactgatccattcgctgtctgctacagtgaaagcaccc
gttgcgccgcaacaggcgaggcgcgccgccgccgcgccgcgccggcaggcggaaaacgcc
tacggcctgtccatcggccaggcggtcagccacgccaagttcggcatcggcgtggtgata
gacgccgagggcaacggggaggatgtgcggctgcagatcaatttcgccgaacacggcgtc
aaatggctggatctgcgctatgcgaaactgactccggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   LNCC_BRAZIL (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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