KEGG   Chromobacterium violaceum: CV_1354
Entry
CV_1354           CDS       T00147                                 
Symbol
ihfA
Name
(GenBank) integration host factor alpha-subunit
  KO
K04764  integration host factor subunit alpha
Organism
cvi  Chromobacterium violaceum
Brite
KEGG Orthology (KO) [BR:cvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cvi03032]
    CV_1354 (ihfA)
   03036 Chromosome and associated proteins [BR:cvi03036]
    CV_1354 (ihfA)
   03400 DNA repair and recombination proteins [BR:cvi03400]
    CV_1354 (ihfA)
DNA replication proteins [BR:cvi03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CV_1354 (ihfA)
Chromosome and associated proteins [BR:cvi03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    CV_1354 (ihfA)
DNA repair and recombination proteins [BR:cvi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      CV_1354 (ihfA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: AAQ59029
LNCC_Brazil: CV1354
UniProt: Q7NYC0
Position
1427104..1427406
AA seq 100 aa
MTLTKAELADLLFDQVGLNKREAKDMVESFFEEIRLALESGDSVKLSGFGNFQLRDKPQR
PGRNPKTGEEIPITARRVVTFHASQKLKGMVEQYHANKQG
NT seq 303 nt   +upstreamnt  +downstreamnt
atgactttgacgaaggctgaactggccgatttgctgtttgaccaggttggtctgaacaaa
cgcgaagccaaggacatggtcgagtcgtttttcgaagagatccggctggcgctggagtcc
ggggattcggttaagctgtccggtttcggcaacttccagttgcgcgacaagccgcagcgt
ccgggccgcaatcccaagaccggggaagagattcccattaccgcgcgtcgtgtggtaacg
ttccacgcaagccagaaactcaagggaatggttgagcaataccatgctaacaagcaaggc
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   LNCC_BRAZIL (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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