KEGG   Chromobacterium violaceum: CV_3975
Entry
CV_3975           CDS       T00147                                 
Name
(GenBank) probable vgr related protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
cvi  Chromobacterium violaceum
Pathway
cvi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cvi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CV_3975
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cvi02044]
    CV_3975
Secretion system [BR:cvi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CV_3975
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Sarcoglycan_1 DUF3540
Other DBs
NCBI-ProteinID: AAQ61637
LNCC_Brazil: CV3975
UniProt: Q7NR10
Position
complement(4297872..4300490)
AA seq 872 aa
MDLSSLLASFASAFNQDQRLLTLELGSGQVAAEQLLPQSLNGEEGVSQAYRYQLTCLSPD
GAIELKTLLGQAARIGIADAQGQETIRCGVVSQARLMGSDGGFAQYGLTIEPPIALLRHR
RTSRVFQDLSVPDIVQQIVHEHQAANPVFARAQTVEFKVGPAQPRSYCLQYREDDFSFIV
RLLHEEGYAWRFEHVDGDAPQVKLAVFDDAYSLPPAEVERVRFHRSDATEEEDGLTDWSA
ARQIVPGNVALATFDYQPVSTQHTGDSSQIDQGPGGQALQSSLQDYDPQGLYYAGDAEQL
SHYARLRQQAHDLQAKSFEGAGSIRGLTAGQWFRLDDHPAHEADSHEQREFVVTGQTLQV
RNNLPTDLQSILPTDDQTDAPFTTRIQAQRHGIPLTPAYAGTEHAKPKSRGVQTATVVGP
AGEEVHTDQHGRIKVQFHWQRPDEHPTIGAALDDKSSCWLRVAMPSAGAGWGHQFIPRIG
QEVLVDFIEGDIDRPVITGVLYNGSHPTPDFSGAGSLPANKTLSGIKSKEHQGGGYNELL
FDDTPGEVRAKLSSEPGKTQLNQGYLAHPRSNGKALPRGDGFELRTDHHGAIRAAHGLLL
TTEAQNGASGKQLAREHAQSQLDAALSLSQALAETASGQLADAMETGPDEIGPDNAKAGK
KTDGHLQHHVDALKAWEAGSNTDKDGKTAKDQAGQQPLLVLSAPAGIAALTEQSQTVSAG
QNLNLVAQRDANHTTGRRWIHNVGQHISLFVAGVKDKVALKLIAAKGKVQVQAQSDAMEL
TADKDVTITSAKQTIHVNAKQEILLTSGGAYIRLKDGKIELHAPGTISIKGASHNFSGPD
QMNPPLPRFPNTVCKQCMAQAFSQANPLVAAK
NT seq 2619 nt   +upstreamnt  +downstreamnt
atggaccttagctctctcctagccagcttcgcctccgccttcaatcaagaccagcgcctg
ctcaccctggagctgggcagcggacaggtcgccgccgagcagctgctgccgcaaagcctc
aatggcgaagaaggcgtgtcccaggcctaccgctatcaactcacctgcctttcccccgac
ggcgccatcgaactcaagaccctgctcggccaggccgcccgcatcggcatcgccgacgcc
cagggccaggagaccatccgctgcggcgtggtcagccaggcccggctgatgggttccgac
ggcggcttcgcccagtacggcctcaccatcgagccgccgatcgcgctactgcgccaccgc
cgcacctcgcgcgtgttccaggacttgagcgtgccggacatcgtccagcagatcgtccat
gagcatcaggcggccaacccggtgttcgcgcgcgcgcaaacggtggagttcaaggtcggc
ccggcgcagccgcgcagctattgcctgcaataccgcgaggacgacttcagcttcatcgtc
cgcctgctgcacgaggagggttacgcctggcgcttcgagcacgtcgacggcgacgcgccc
caggtcaagctggcggtgttcgacgacgcctacagcctgccgccggccgaggtggagcgg
gtgcgcttccaccgcagcgacgcgacggaagaggaagacggcctcaccgactggagcgcc
gcccgccagatcgtgcccggcaacgtggcgctggccaccttcgactaccagccggtgtcc
acccagcacaccggcgacagcagccagatcgaccagggcccgggcggccaggcgctgcag
tccagcctgcaggactacgatccgcagggcctgtactacgccggcgacgccgagcagttg
agccactacgcccggctgcgccagcaggcgcacgacctgcaggccaagagcttcgaaggc
gccggctccatccgcggcctgaccgccggccagtggttccgcctggacgaccacccggcg
cacgaggccgacagccacgagcagcgcgaattcgtcgtcaccggccagacgctgcaggtg
cgcaacaacctgccgaccgatctgcagtccatcctgccgacggacgaccaaaccgacgcc
ccgtttaccacccgcattcaggcccagcgccacggcatcccgctgaccccggcctatgcc
ggtacagaacacgccaaaccgaaatcgcgcggcgtgcagaccgccactgtggtgggaccg
gccggcgaggaagtccacaccgaccaacacggccgcatcaaggtgcagttccactggcag
cggccggacgagcaccccaccatcggcgccgcgctggacgacaaatcctcctgctggctg
cgcgtcgccatgccgtcggccggcgccggctggggccaccagttcatcccgcgcatcggc
caggaagtgctggtcgacttcatcgaaggcgacatcgaccgcccggtgatcaccggcgtc
ttgtacaacggcagccaccccacgcccgacttcagcggcgccggcagcctgccggccaac
aagacgctgtccggcatcaaatccaaagaacaccagggcggcggctacaacgagctgctg
ttcgacgacaccccgggcgaagtgcgcgccaagctcagcagcgagccgggcaagacccag
ctcaaccagggctacctcgcccacccgcgcagcaacggcaaggccctgccacgcggcgac
ggcttcgagctcagaaccgaccaccacggcgccatccgcgccgcccacggcctgctgctc
accaccgaagcgcagaacggcgcatccggcaaacagctggcgcgcgagcatgcgcagagc
cagctcgacgccgccttgagcctctcgcaagccttggccgaaaccgccagcggccagctg
gccgacgccatggaaaccggccccgacgaaatcggcccggacaacgccaaggccggcaag
aaaaccgacggccacctgcagcaccacgtcgacgcgctgaaggcctgggaagcgggatcg
aacaccgacaaggatggcaagaccgccaaggatcaagcgggacagcagccgctgctggtg
ctgtccgcgcccgcaggcatcgccgccctcaccgaacaaagccagaccgtctccgccggc
cagaacctgaacctggtcgcccagcgcgacgccaaccacaccacgggacggcgctggatt
cacaacgtgggccagcacatcagcctgttcgtggcgggggtgaaggacaaggtggcgctg
aagctgatcgcggcgaagggcaaggtgcaggtgcaggcgcagagcgacgcgatggagctg
acggcggataaggatgtgaccatcacctcggccaagcagacgatacacgtcaatgctaag
caggaaatcctgttgacctccggtggggcctatatccgcctgaaggacggcaagatcgag
ctacacgcgccgggcaccatcagcatcaagggtgccagccacaatttcagcggaccggat
caaatgaatccgccgctgccgcgcttccccaataccgtatgcaagcaatgcatggcacag
gcgttcagccaggccaacccgctggtggccgccaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   LNCC_BRAZIL (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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