KEGG   Chlorella variabilis: CHLNCDRAFT_14225
Entry
CHLNCDRAFT_14225  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
cvr  Chlorella variabilis
Pathway
cvr03013  Nucleocytoplasmic transport
cvr03015  mRNA surveillance pathway
cvr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHLNCDRAFT_14225
  09122 Translation
   03013 Nucleocytoplasmic transport
    CHLNCDRAFT_14225
   03015 mRNA surveillance pathway
    CHLNCDRAFT_14225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_14225
   03041 Spliceosome [BR:cvr03041]
    CHLNCDRAFT_14225
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     CHLNCDRAFT_14225
Spliceosome [BR:cvr03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    CHLNCDRAFT_14225
SSDB
Motif
Pfam: RRM_1 RRM_5
Other DBs
NCBI-GeneID: 17353760
NCBI-ProteinID: XP_005846487
JGI: ChlNC64A_1_14225
UniProt: E1ZIS6
Position
Unknown
AA seq 148 aa
MAQLLKQLNPAISQYKDRRFCGTQQEFEECLHTSTTVYVGNLSFFTTEDQIFEVFSKVGD
VKRIVMGLDKHRSTPCGFCFVVYYTREDTEDCVKYVNGTMLDDRPIRVDFDWGFVEGRQF
GRGRSGGQVRDEYRMDFDSGRGGYGSIL
NT seq 444 nt   +upstreamnt  +downstreamnt
atggcgcaactcctcaagcaattgaaccctgcaatcagccagtacaaggacaggcggttt
tgcggcacgcagcaggagtttgaggaatgcctgcacacctccaccaccgtctatgtgggc
aacctgtcctttttcacgactgaagaccagatcttcgaggtgttcagcaaggtgggcgac
gtgaagcgcattgtgatggggctggacaagcacaggtccacgccctgcggcttctgcttt
gtggtctattacacgcgggaggacaccgaggattgtgtcaagtacgtcaacggcaccatg
ctcgacgaccgccccatccgcgtcgactttgactggggctttgtggaggggcggcagttc
gggcgcggccgatctggcgggcaggtgcgggacgagtaccgcatggacttcgactcgggc
cggggcggctacggaagcatcctg

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system