KEGG   Corynebacterium vitaeruminis: B843_08850
Entry
B843_08850        CDS       T03042                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
cvt  Corynebacterium vitaeruminis
Pathway
cvt03030  DNA replication
cvt03430  Mismatch repair
cvt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cvt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B843_08850 (dnaE)
   03430 Mismatch repair
    B843_08850 (dnaE)
   03440 Homologous recombination
    B843_08850 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cvt03032]
    B843_08850 (dnaE)
   03400 DNA repair and recombination proteins [BR:cvt03400]
    B843_08850 (dnaE)
Enzymes [BR:cvt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B843_08850 (dnaE)
DNA replication proteins [BR:cvt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B843_08850 (dnaE)
DNA repair and recombination proteins [BR:cvt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B843_08850 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AHI23155
UniProt: W5Y2P4
Position
complement(1951645..1955205)
AA seq 1186 aa
MAKKSSFVHLHNHTEYSMLDGMAKVDMLAKEVTRQGMPAVGMTDHGNMFGSDAFYRAMTA
AGVKPIIGIEAYLAPESRFNKQRVRWGEPHQKADDVSASGAYLHQTMLAETPEGLRNLFY
LSSMASYEGQLGKWPRMDAELIAERATGIIATTGCPSGDVQTRLRLGQFDEALEAAAMWQ
DIYGKENYFLELMDHGLDIETRVRSELLEIGRKLDLPPLVTNDCHYVLESQAPAHEAMLC
VQTGKTLSDPDRFKFDGSGYYIKTAEQMRETWDHLVPDACDNTLWIAERVQDYSSLWEEH
PHDRMPIADVPEGHTPTTWLHHQVMEGLQDRFPGAEVPREYIERAEYEISVIDMKGYPSY
FLIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPERPSAP
DIDIDFDDRRRSEMIRYASERWGEDKIAQVITFGTVKTKQALKDSARVQYGQPGYQIADR
ITKALPPAIMAKDIPLSGIMDPEHPRYGEAAEVRNLIETDPDVKKIYDTARGLEGVVRQA
GVHACAVIMASVPLMDHIPMWKRAADGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDA
LENIKINRGEELHLESLTTDDPKVYDLLSRGDTLGIFQLDSGGMQDLLKRMQPTGFHDIV
ASLALYRPGPMGVEAHWNYADRKNGRKPIEPIHPELEEPLKEILEETYGLIVYQEQIMRI
SQKVANYTAGEADGFRKAMGKKKPEVLAKQYDKFWAGMQENGFSKDAMDALWGTIEPFAS
YAFNKSHAAGYGLVSYWTAYLKANYTAEYMAALLTSVADKKDKSAIYLSDCRHLGISVLS
PDVNESALNFLPVGTDIRFGLGAVRNVGEDVVASIVKAREEKGLFKDFSDYLDKIDTVAC
NKRVTESLIKAGAFDSMGHPRKGLMMIHEDAVDSVISTKKAADKGQFDLFAGFGGEESVA
ENVFAVSVPDENWDRKHQLALEREMLGLYVSGHPLDGFEEALDAQTDTALTTYLSGELKH
GTEVQIGGIISAVDRRYSKKDGSPWAIVTIEDHHGASVELLVFNKVYAIVGSQIVEDNIV
LAKAHVSIRDDRSSLFCDDMKIPDLGPGNGSGLPLRLTMRTEQCTMANIARLKEVLLANA
GESDVYLNLVNGEESTVMILGEGLRVARTASLMGDLKATMGPGIIG
NT seq 3561 nt   +upstreamnt  +downstreamnt
atggcgaaaaaatcttcctttgtgcacctccacaaccacaccgagtactcgatgctcgac
ggaatggcgaaggtggacatgctcgcgaaggaagtcaccaggcaggggatgcccgccgtc
ggcatgaccgaccacggcaacatgttcggctccgatgcgttctaccgcgcgatgaccgcc
gcgggcgtcaagccgatcatcggcatcgaggcctacctcgcgcccgagagccgcttcaac
aagcagcgcgtgcgctggggcgagccgcaccagaaggccgacgacgtctccgcgtccggc
gcctacctgcaccagaccatgctggcggagaccccggagggcctgcgcaacctcttctat
ctttcctcgatggcctcctacgagggccagctgggcaagtggccgcgcatggacgccgag
ctcatcgccgagcgcgccaccggcatcatcgccaccaccggctgcccgtccggtgacgtg
caaacccgacttcgcctcggacagttcgacgaggcgctcgaggccgccgcgatgtggcag
gacatctacggcaaggagaactacttcctcgagctcatggaccacggcctcgacatcgag
acccgcgtgcgttccgagctgctcgagatcggccgcaagctggacctgccgccgctggtg
accaacgactgccactacgtgctggaatcccaggcgcccgcgcacgaggccatgctctgc
gtgcagaccggcaagaccctctccgacccggaccgcttcaagttcgacggctccggctac
tacatcaagaccgccgagcagatgcgcgagacctgggaccacctcgtccccgacgcctgc
gacaacaccctgtggatcgccgagcgcgtccaggactacagctccctgtgggaggagcac
ccccacgaccgcatgccgatcgcggacgtgcccgagggacacaccccgaccacctggctg
caccaccaggtcatggaggggctccaggaccgcttcccgggcgcggaggtgccgcgcgag
tacatcgagcgcgccgagtacgagatctcggtcatcgacatgaagggctacccgtcctac
ttcctcatcgtcgccgagctcatcaaacacgcccgcagcatcggcatccgcgtcgggcct
ggccgtggctccgccgcgggcgcgctggtcgcctacgcgctgacgatcaccaacatcgac
ccgatcgagcacggcctgctgttcgagcgattcctcaacccggagcgcccgtccgcgccc
gatatcgatattgacttcgacgatcgccgccgctccgagatgatccgttacgcctccgag
cgctggggcgaggacaagatcgcccaggtgatcaccttcggcacggtcaagaccaagcag
gcgctcaaggactccgcccgcgtgcagtacggccagcccggctaccagatcgccgaccgc
atcacgaaggcgctcccgccggccatcatggccaaggacatcccgctgtccggcatcatg
gacccggagcacccgcgctacggcgaggccgccgaggtgcgcaacctcatcgagaccgac
ccggatgtcaagaagatctacgacaccgcgcgcggcctcgagggcgtggtccgccaggcc
ggcgtccacgcctgcgcggtgatcatggcatccgtgccgctcatggatcacatcccgatg
tggaagcgcgccgccgacggtgcgctcatcaccggctggccgtaccccgcctgcgaggcc
atcggcctgctgaagatggacttcctgggcctgcgcaacctcaccgtcatcggcgacgcc
ctggaaaacatcaagatcaaccgcggcgaggagctccacctcgagtcgctgaccacggac
gaccccaaggtctacgacctgctctcccgcggcgacactcttggcatcttccagctcgac
tccggcggcatgcaggacctgctcaagcgcatgcagccgaccggcttccacgacatcgtg
gcgtcgctcgcgctctaccgtccgggcccgatgggtgttgaggcgcactggaactacgcg
gaccgcaagaacggccgcaagccgatcgagccgatccacccggagctcgaggagccgctc
aaggagatcctggaggagacctacggtctcatcgtctaccaggagcagatcatgcgcatc
tcgcagaaggtggccaactacaccgccggcgaggcagacgggttccgcaaggcgatgggt
aagaagaagcccgaggtcctggccaagcagtacgacaagttctgggcaggcatgcaggaa
aacggcttctccaaggacgcgatggacgccctgtggggcaccatcgagccgttcgcctcc
tacgcgttcaacaagtcccacgccgcgggctacggtctggtgtcctactggacggcttac
ctcaaggcgaactacaccgccgagtacatggcggccctgctcacctcggtcgcggacaag
aaggacaagtccgccatctatctctccgactgccgccacctgggcatctcggtgctctcg
ccggacgtcaacgagtccgccctcaacttcctcccggtgggcaccgatatccgcttcggc
ctgggcgcggtacgcaacgtcggcgaggacgtcgtggcctcgatcgtcaaggcccgcgag
gagaaggggctattcaaggacttctcggactacctagacaagatcgacaccgtggcctgc
aacaagcgcgtgacggagtcgctcatcaaggcgggcgccttcgactcgatggggcacccg
cgcaagggcctcatgatgatccacgaggacgccgtcgactccgtgatcagcacgaagaag
gccgcggacaagggccagttcgacctgttcgcgggcttcggcggcgaggaatcggtggcg
gagaacgtcttcgcggtctccgtccccgacgagaactgggaccgcaagcaccagctcgcc
ctcgagcgcgagatgctcggcctctacgtctcgggccacccgctcgacggcttcgaggag
gcgctcgacgcgcagacggacaccgcgctgaccacctacctctccggcgagctcaagcac
ggcaccgaggtgcagatcggcggcatcatctccgccgtcgaccgccgctactccaagaag
gacggctcgccgtgggcgatcgtcaccatcgaggatcaccacggcgcgtccgtggagctg
ctggtgttcaacaaggtctacgccatcgtcggctcgcagatcgtagaggacaacatcgtg
ttggccaaggcgcatgtgtccatccgcgacgaccgctcctcgctgttctgcgacgacatg
aagatccccgacctgggcccgggcaacggctccggcctgccgctgcgcctgaccatgcgc
accgagcagtgcaccatggcgaacatcgcgcgcctgaaggaggtgctgcttgccaacgcg
ggcgagtcggatgtctacctcaacctcgtcaacggggaggagtcgaccgtcatgatcctg
ggggaggggctgcgcgtggcccgcaccgcttcgctcatgggcgacctcaaggcgacgatg
ggccccggcatcatcggctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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