KEGG   Citrobacter werkmanii: CO701_05010
Entry
CO701_05010       CDS       T05129                                 
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
cwe  Citrobacter werkmanii
Brite
KEGG Orthology (KO) [BR:cwe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cwe03019]
    CO701_05010
   03009 Ribosome biogenesis [BR:cwe03009]
    CO701_05010
   03036 Chromosome and associated proteins [BR:cwe03036]
    CO701_05010
Enzymes [BR:cwe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CO701_05010
Messenger RNA biogenesis [BR:cwe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CO701_05010
Ribosome biogenesis [BR:cwe03009]
 Eukaryotic type
  90S particles
   RNase
    CO701_05010
 Prokaryotic type
  rRNA processing factors
   CO701_05010
Chromosome and associated proteins [BR:cwe03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CO701_05010
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ATF48538
Position
1006878..1007558
AA seq 226 aa
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEQLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gaactgttgcagcaggcattaactcatcgcagtgccagcagcaaacataacgagcgttta
gaatttttaggcgactctattttgagctttgttattgccaatgcgttgtatcatcgtttt
ccgcgtgtggacgaaggtgatatgagtcgcatgcgcgccacgctggtgcgcggtaatacg
ctggctgaattagcccgtgagtttgatctcggcgaatgtttacgtttggggccgggcgaa
ctgaaaagcggcggcttccgtcgtgaatctattctggctgataccgtcgaagcactgatc
ggcggcgtcttcctcgacagtgatattcagactgttgaacaactgatccttaactggtat
caaacccgtctggatgaaattagtccgggcgacaaacaaaaagatccgaaaacgcgtttg
caggaatacttgcagggtcgccacctgccgctgccgtcttatctggtagtacaggtccgt
ggcgaagcgcacgatcaagaatttactatccactgccaggttagcggcctgagtgaaccg
gtggttggcacaggttcgagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system