KEGG   Synechococcus sp. JA-3-3Ab: CYA_1324
Entry
CYA_1324          CDS       T00318                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
cya  Synechococcus sp. JA-3-3Ab
Pathway
cya00300  Lysine biosynthesis
cya00470  D-Amino acid metabolism
cya01100  Metabolic pathways
cya01110  Biosynthesis of secondary metabolites
cya01120  Microbial metabolism in diverse environments
cya01230  Biosynthesis of amino acids
Module
cya_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:cya00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CYA_1324 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CYA_1324 (dapF)
Enzymes [BR:cya01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     CYA_1324 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Pro_racemase
Other DBs
NCBI-ProteinID: ABC99501
CyanoBase: CYA_1324
UniProt: Q2JUV6
Position
complement(1340188..1341045)
AA seq 285 aa
MPSRLSFHKYQGLGNDFILVDNRHQPQPCLTPEEAVALCNRRFGVGADGVIFLLPGQEGA
DFSMRLFNSDGSEAEMCGNGIRCLARFLQDLGIPGQDGAYQIHTLAGRIVPQVRPDGLVT
VDMGIPRLLAGQIPTTLAKPEEKVVRQPLQVGGREWAVTAVSMGNPHCVVFLEEGGSLEE
LDLERVGPLFEHHPAFPERTNTEFAQVLGPNYLRLRVWERGAGVTLACGTGACAALVAAV
LEERAEPQATVELPGGNLEIRWDPDTQHVWMTGPALPVFSGTTAE
NT seq 858 nt   +upstreamnt  +downstreamnt
ttgccctcccgtctctccttccacaaataccaggggctggggaacgactttatcttggtg
gacaaccgccaccagccgcagccctgtctgacgcctgaggaagccgttgccctctgcaac
cgccgctttggcgtgggggccgatggggttatctttctgctgccggggcaggagggggcc
gacttcagcatgcgcctgttcaacagcgacggctcggaggcggagatgtgcggcaacggc
atccgctgtttggcccgctttttgcaggatctggggatccctggccaggacggcgcctac
cagatccacaccttggcggggcggatcgtgccgcaggtgcggcccgatggcttggtaaca
gtggacatggggatccctcgcctcttggccgggcagatccccaccacgctggccaaacca
gaggaaaaggtggtgcggcagcccctgcaggtaggcgggcgggagtgggcggtgacggcg
gtgagcatgggcaacccccactgtgtggtctttttggaagaagggggatccctggaagag
ctggacttggaaagggtgggccccctgtttgagcatcacccggcttttcccgagcgcacc
aacaccgaatttgcccaggtgctcggcccaaattacctgcggctgcgggtttgggagcgg
ggggcaggggtgacgctggcctgtgggacaggcgcctgtgccgccttggtggccgccgtt
ttggaagagcgggccgagccgcaagccacggtggagctgccgggaggcaatctggagatt
cgctgggatcccgatacccaacacgtgtggatgaccgggccggccctgcccgttttcagc
ggcaccacggccgagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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