KEGG   Synechococcus sp. JA-3-3Ab: CYA_1647
Entry
CYA_1647          CDS       T00318                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
cya  Synechococcus sp. JA-3-3Ab
Pathway
cya03030  DNA replication
cya03430  Mismatch repair
cya03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cya00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CYA_1647 (dnaN)
   03430 Mismatch repair
    CYA_1647 (dnaN)
   03440 Homologous recombination
    CYA_1647 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cya03032]
    CYA_1647 (dnaN)
   03400 DNA repair and recombination proteins [BR:cya03400]
    CYA_1647 (dnaN)
Enzymes [BR:cya01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CYA_1647 (dnaN)
DNA replication proteins [BR:cya03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CYA_1647 (dnaN)
DNA repair and recombination proteins [BR:cya03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CYA_1647 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_3 DNA_pol3_beta_2
Other DBs
NCBI-ProteinID: ABC99804
CyanoBase: CYA_1647
UniProt: Q2JU25
Position
complement(1646277..1647641)
AA seq 454 aa
MVQAQRPADWEVETGSPASAPRDGRSGDPFPVNRTESFGKAVDLPAGCLCFTCEQAELSH
HLAAVSRAVASRPALPVLANVLVEASAEAQRVALTAFDLNLGIRSEFEAEVKGSGRTTLP
AKLLSDIVSRLPSGPIGLSQVPESAAVTLTSAAGQYQLRGMPAEEYPTLPEIAPRTADAD
AEEESLAAQILELPIESLLQGIGQTLFAASGDDTKQVLTGVHVKLLTGDPPRLEFAATDG
HRLAIVQVEAEGIPVDLAAGGTKLDFTIPARTLREVERILGAQTAASAVELRFDRSQVQF
ILPPGAGSAQCQQRITSRLLEGQYPDYNRLIPRQFERHVTLERRPLIESLERVGVFAAQR
NEIIKFNLSEATQTLRISTEAPDVGSGEESLPVQMSGPDLELAFNVRYLLEALKVFHTQQ
VSLELNGATQPAIWKPIGATRLCYLVMPVQLRAT
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggtgcaagctcaacgtcctgcggattgggaagtcgaaaccggatcgcccgcgtctgcc
ccgcgcgacggcaggtctggggatcccttccccgtcaacaggacagagtccttcggcaag
gctgtcgacctacctgccggttgtctttgcttcacctgtgagcaagctgagctcagccac
caccttgctgcagttagccgagccgttgccagccgtcctgccctgccagttttggccaac
gtgctggtagaggcaagtgcagaggcacagcgggttgccctgacggcctttgacttgaac
ttgggcattcgcagcgagttcgaggccgaggtgaagggatccggtcgcaccactctgccg
gccaagctgctcagcgacatcgtcagccgtttgcctagcggcccgatcggcctcagccaa
gtgccggagagcgctgccgtgacccttacatcggccgccggccagtaccagctacgcggc
atgcctgcggaagagtatcccaccttgcccgagatagcgccccgtactgccgatgccgat
gctgaggaggagagcttagccgcccagatccttgagctgcccatcgagagcctgctgcaa
gggattggccaaaccctctttgccgcttccggtgatgacaccaagcaagtgcttacgggt
gtacatgtcaagctcttgaccggggatccgccgcggctggagtttgcggccaccgatgga
catcgcctggcgatagttcaggtggaggcggaagggatcccagttgatttggcggctggg
gggacgaagctggatttcaccattcccgctcggactctacgagaggtggagcgcatcctc
ggcgcccagacggccgcctccgcggtggaactgcggtttgaccggtcgcaggtgcaattt
attttgccccctggcgccggcagcgctcagtgccagcagcggattaccagccgccttttg
gagggccagtaccccgactacaaccgcctgatcccccggcaatttgagcggcatgtaacc
ctggagcgtaggcctttgatcgagtccttggagcgagtgggggtgtttgctgcccagcgg
aacgagatcatcaagttcaacctttctgaggcaacccaaaccctacgcatcagcaccgag
gcgcccgatgtgggcagcggcgaggaatctctgccggtacagatgtccggccctgacctg
gagctggcttttaatgtgcgctacctgctggaggcccttaaggtgtttcatacacagcag
gtgagcctggagctgaacggcgctacccagccagccatctggaagccgattggagcgacg
cgcctctgctatttggtcatgccggttcaactgcgggctacctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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