KEGG   Gloeothece citriformis: PCC7424_0741
Entry
PCC7424_0741      CDS       T00808                                 
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
cyc  Gloeothece citriformis
Pathway
cyc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cyc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PCC7424_0741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cyc03021]
    PCC7424_0741
   03400 DNA repair and recombination proteins [BR:cyc03400]
    PCC7424_0741
Enzymes [BR:cyc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PCC7424_0741
Transcription machinery [BR:cyc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PCC7424_0741
DNA repair and recombination proteins [BR:cyc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PCC7424_0741
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 DUF5887
Other DBs
NCBI-ProteinID: ACK69197
UniProt: B7KG04
Position
821647..824937
AA seq 1096 aa
MSNLTYNLLPDLISIQRSSFRWFLQEGLIEELDSFSPITDYTGKLELHFLGQDYKLKEPK
YTVDEAKRRDSTYSVQMYVPTRLINKETGNIKEQEVFIGDLPLMTERGTFIINGAERVIV
NQIVRSPGVYYKCEYDKNGRRTYSASLIPNRGAWLKFETDKNGLVWVRIDKTRKLSAQVL
LKAIGLSDNEILDALRHPDFYQKTLDKEGNPSEEEALLELYRKLRPGEPPTVSGGQLLLE
SRFFDNKRYDLGRVGRYKLNKKLRLNVTDTTRVLTSEDILSAIDYLINLEFDIGSTDDID
HLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSEADSLTPASLVNPKPLVAAIKEFF
GSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDIHPSHHGRICPVETPEG
PNAGLIGSLATYARVNQYGFIETPYYRVENGRARRDLEPVYLTADEEDEFRVAPGDVATD
EEGHIIGESVPVRYRHEFSTTEPQQVDYIAVSPVQIVSVATSLIPFLEHDDANRALMGSN
MQRQAVPLLRPERPLVGTGLEAQTARDSGMVIVSRTHGIVTHVDATTIRVQVKGEERVIE
YELQKYQRSNQDTCLNQRPLVYTGEEVVPGQVLADGSATEGGEIALGQNILVAYMPWEGY
NYEDAILISERLVYDDVYTSIHVEKYEIEARQTKLGPEEITREIPNVGEDALRNLDERGI
IRIGAWVEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKGRVVD
VRVFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPIEDMPYLPD
GRPVDIVLNPLGVPSRMNVGQVFECLLGWAGENLGVRFKITPFDEMYGEEASRETVHGLL
EQASHRPGKDWVFDTENPGKIMVYDGRTGEPFDRPVTVGQAYMLKLVHLVDDKIHARSTG
PYSLVTQQPLGGKAQQGGQRFGEMEVWALEAYGAAYTLQELLTVKSDDMQGRNEALNAIV
KGKPIPRPGTPESFKVLMRELQSLGLDIAVHKVETLTDGTSRDVEVDLMADMGRRTPTRP
TYESLTTEDLEEEVNG
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgagtaacctaacttacaaccttcttccggatttaatctcaattcaacgctctagtttt
cgttggtttctccaagaaggattaattgaagaactcgatagcttttctccgattacagac
tacaccggaaaattagaacttcactttttaggacaagattataaacttaaagaacccaaa
tatacagttgatgaagctaaacgacgggatagcacctattccgttcaaatgtatgtgccg
actcgtttaattaacaaagaaacgggaaatattaaagagcaagaggtcttcatcggggat
ttacccttgatgacagaacggggaacatttattatcaatggagcagagcgagtcatcgtt
aatcaaattgtccgctcacccggagtttattataagtgtgaatatgataaaaatggtcgt
cgcacttattcagcctctttgattcctaaccgaggagcatggttaaaatttgaaaccgat
aaaaacggtttagtttgggtcagaattgataaaacccgcaaattatccgcccaagttctc
ctcaaagcgatcgggttatccgataatgaaattcttgatgctctacgtcatccggatttc
tatcaaaaaactttagataaagaaggcaatccctcagaagaagaggcactcttagaacta
taccgcaaactacgacccggtgaacccccaacagtaagcgggggacaattattgttagaa
tcgcgcttttttgataacaaacggtatgatttgggacgagtagggcgctataagctcaat
aaaaaattgcgcttgaatgtgacggataccaccagagtgttaaccagtgaggatatttta
tcggcgatcgattatttaatcaatttggaatttgacatcggtagcacggatgatattgac
catttgggaaatcgccgggtgcgctcggtgggagaattgctacaaaaccaggtgagagta
ggtctaaatcgcttagaaagaattattcgggagcggatgacagtcagtgaggccgatagt
ttaacgccggcttcgttggtgaatcctaagcctctggtagcagcgattaaagagtttttt
gggtcttcccaattatctcagtttatggatcagacaaatcccttggcagagttgacccat
aaacgccggttatcggctttagggccaggcgggttgacgcgagaaagagccgggtttgcg
gtgcgggatattcacccctctcatcatggacggatttgtccggtagaaacccctgaaggg
cccaatgcggggttaattggttcgttggcgacttatgcgcgagtgaatcagtatggattt
attgaaaccccttattatcgggtagaaaatggccgagcgcgtcgagatttagaaccggtt
tatttgacggcggatgaggaagatgaatttcgggtagctccgggagatgtggcgacggat
gaagaaggccatattatcggggagtcggtgccggttcgctatcgtcacgaattttcgaca
acagaaccccaacaggtagattatattgcggtttcgccggtgcagattgtctcagtagcc
acctctttgattccgttcttggaacatgatgatgctaaccgggcactgatggggtcgaat
atgcagcgtcaggcagttcctctgttgcgtccggagcggcctttagtaggaacgggactg
gaggcgcaaacggcgcgagattcggggatggtgattgtttcccggactcatgggattgtc
actcatgtggatgcgacgacgattcgggttcaagttaagggtgaggagcgagtgattgag
tatgagttacagaaatatcaacgctcgaaccaagatacttgtttaaatcagcggcctttg
gtctataccggagaagaagttgttcccggtcaggtgttggcagatgggtcagccaccgaa
gggggagaaatcgccctaggacagaatattttggtggcttatatgccttgggaaggctat
aactatgaggacgcgattttgatcagtgaacggctggtctatgatgatgtttatacgagt
atccacgtagaaaagtatgaaatagaagcccgtcaaaccaagttagggccagaggagatt
acgcgggaaattcctaatgttggggaggatgccttaagaaatctcgatgagcgcggaatt
atccgtattggggcttgggtcgaagccggtgatattttggtgggtaaagtgactcccaaa
ggagaatcagatcaaccccctgaagaaaagctcctacgggcgattttcggagaaaaagcc
agagatgtgagagataattccctgcgtgtgcccaatggtgaaaaaggacgggttgtggat
gtgcgggtgtttacccgtgaacagggggatgaattgcctcctggggcgaatatggtcgtt
cgtgtctatgtagcccaaaagcggaaaatccaagtaggggataaaatggcgggtcgtcac
ggaaataaggggattatttcccgaattctgccgattgaggatatgccttatttacccgat
ggccgtccagttgatattgttctcaatcccttgggtgtgccttcccggatgaatgtgggt
caggtgtttgagtgccttttgggatgggctggagaaaatttgggggtacgctttaaaatt
actccttttgatgaaatgtatggagaggaagcctcccgggaaaccgtgcatggactttta
gagcaagcttcccaccgaccgggtaaagattgggtctttgataccgaaaatccagggaaa
atcatggtttatgatgggcgcaccggtgaaccgtttgatcgaccggtgacagtaggtcag
gcttatatgttgaagctggttcacttggtagatgataagattcacgctcgttcgaccggc
ccctactctttggtgactcagcaacccctcggcggtaaggctcaacaggggggtcaacga
ttcggagagatggaggtatgggcattagaagcttatggggcggcttatacccttcaggag
ttattaacggttaagtccgatgatatgcagggacgtaatgaggcgttaaatgcgatcgtt
aaaggtaagccgattcctcgtccgggtacgccagagtcctttaaggtattgatgcgggag
ttacagtccttggggctggatattgctgtgcataaggtagaaactctaacggatggaact
tctagagatgtggaggtagatttgatggcggatatgggtcgtcgcactccaacccgtccg
acttatgaatctctgacgacggaagatctagaggaagaagtgaacggttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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