KEGG   Cyanobium sp. NIES-981: CBM981_1159
Entry
CBM981_1159       CDS       T04888                                 
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
cyi  Cyanobium sp. NIES-981
Pathway
cyi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cyi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CBM981_1159 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cyi03400]
    CBM981_1159 (recD)
Enzymes [BR:cyi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CBM981_1159 (recD)
DNA repair and recombination proteins [BR:cyi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CBM981_1159 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 AAA_11 UvrD_C_2 Viral_helicase1 AAA_22 UvrD-helicase AAA_5 Helicase_RecD PIF1 AAA_16 AAA SH3_13 SLFN-g3_helicase nSTAND3 TrwB_AAD_bind Pif1_2B_dom AAA_7 AAA_28
Other DBs
NCBI-ProteinID: SBO42870
UniProt: A0A182APB7
Position
I:1052730..1054400
AA seq 556 aa
MTAPTSAPTPAATPAPAQAPQTPAWLDALTGGLVEALPRLHGCPPDPAIEATLAAMAHLL
AAGELELVLPDPQQREQLAASPLCSGPWSPLVLEGDRLLWRRWFQQREAVLEALCQRAGP
ARWQPCGLEEARQRAAAQGEGLDADQRGAVAAALHYGLVLLQGGPGTGKTSTVARMLAAL
RAHAPAARMQLAAPTGKAAARLRAALAGARGGSAMACSTLHRLLESQGERFGRHRHHPLD
LDLLVIDEVSMVDLELMGAVLEALPSSCRLVLVGDAAQLPPVRPGAVLLELQTPRRREAL
GGAVVELHTTYRNNGAIAQVADQLRWQGAAAADAEPSGSWRALCPTLERLPATANLHWLP
ASPLHLPPALLERLRRHQRALQRQAQALESGDHAAARALLKQLDALLVLSPARRGRWGVE
AVHRALLGEALEQPIQAWPAGTPVLCQRNLPAPGLANGDVGIVVDAAGTAGASHGQASAG
RRLLFAPGGGSELLWLHPAQLPDPQPALALTVHKAQGSEAEEVWVLIPDSGRPTDRLLYT
ALTRARQQAHLITPPP
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgacggcacccacctcagcgccgactccggccgcgactccggcaccagcccaggcgccg
cagactccagcctggctggacgccctcacgggcggactggtggaagccctgccgcggctg
catggctgcccccccgatcccgccatcgaggcgacgctcgccgccatggcccacctgctg
gccgccggtgagctggaactggtgctgcccgacccgcagcagcgggagcagctggccgcg
tccccgctgtgcagcgggccatggagtccgctggtgctcgagggtgaccggctgctgtgg
cggcgctggttccagcagcgggaggcggtgctggaggccctgtgccagcgggccggacca
gcccgctggcagccctgcggcctcgaggaggccaggcaaagggctgccgcccagggtgag
ggcctggatgctgaccagcggggggccgtggccgcggcgctgcactacgggctggtgctg
ctgcagggcggaccgggcaccggcaagaccagcaccgtggcccgcatgctggcagccctg
cgcgctcacgctcccgcagcccgcatgcagctggcggcacccaccggcaaggcggcggca
cggctgcgtgccgcccttgccggcgcccggggcggctccgccatggcctgcagcacgctc
caccggctgctggagagccagggagagcgtttcggacgccaccgccaccacccgctcgat
ctcgacctgctggtgatcgacgaggtgtcgatggtggatctggagctgatgggcgccgtg
ctggaggccctgccgtccagctgccgcctggtgctggtgggcgatgccgcccagctccca
ccagtgcggccgggagctgtgctgctggagctgcagacccctcggcggcgtgaggctctg
ggtggggccgtggtggagctgcacaccacttaccgcaacaacggcgccatcgcccaggtg
gcggaccagctgcggtggcagggagcggcagcggcagacgccgagccttccggcagctgg
cgcgccctgtgccccaccctggagcggctgccggccacggccaacctgcactggctgccg
gcctcgcccctccacctgccccccgccctgctggaacggctgcggcggcaccagcgggcg
ctgcagcgccaggcccaggccctggagagcggcgaccatgccgcggccagggccctgctg
aaacagcttgatgccctgctggtgctgagccccgcgcggcgggggcgctggggggtggag
gcggtgcaccgggccttgctgggcgaagcgctcgagcagccgatccaggcctggccggcc
ggcaccccggtgctctgccagcgcaatctccctgccccggggctggccaacggggatgtg
ggcatcgtggtggacgcggccgggacagccggggcctcccacggacaggccagcgccggg
cggcggctgctcttcgccccggggggcggcagtgagctcctgtggctgcacccggcccag
ctgcccgatccccagccggccttggctctcacggtgcacaaggcccagggcagcgaagcc
gaggaggtgtgggtgctgatccccgacagcggccgtcccacggaccggctgctctacacc
gcgctgacccgggcgcggcagcaggcccacctgatcaccccgccgccctga

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