KEGG   Gloeothece verrucosa: Cyan7822_3165
Entry
Cyan7822_3165     CDS       T01310                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cyj  Gloeothece verrucosa
Pathway
cyj03410  Base excision repair
cyj03430  Mismatch repair
cyj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cyj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Cyan7822_3165
   03430 Mismatch repair
    Cyan7822_3165
   03440 Homologous recombination
    Cyan7822_3165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cyj03400]
    Cyan7822_3165
DNA repair and recombination proteins [BR:cyj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Cyan7822_3165
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Cyan7822_3165
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Cyan7822_3165
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: ADN15119
UniProt: E0UAZ7
Position
complement(3518194..3520539)
AA seq 781 aa
MLPHPQWQILTPVEIPRWFQEIVKGYTRNSDGLMAAQLLWQRGITDPLQLPGFLDPDAYQ
PSSPFAFGQEMKWAVQRLQQALSSGEKLTIWGDFDADGITATSVLWEGLGEFFPQYLQLD
YYIPNRFSESHGLNCSGIDRLARQGTRLIITCDTGSTNLTEIEYANQLGIDIIISDHHTL
PQDRPPVIAIINPRYFDSSHPLFHLSGVAVAYKLVEALYQTLPDLPKNPLLNLLDLVAIG
LIADLVQLVGDCRYLAQRGIQKLQQQLKNPTRPGIARLLELCQRSGDRPTDISFGLGPRI
NAVSRIQGDATFCVELLTSKDSQRCQKLALETELANTRRKALQKEITAQVQKKLSQLDLS
TTHVIVLEDPQWQSGVLGLVAGQIATEYNRPTILLTPGDEENADNAASLAKIARGSARSV
NHIDLYQLVASQSHLLHRFGGHPLAAGLSLPVENISLFRDGINQQLRQQHGDLALRGPVI
EADLVVSVAELGKALFWELKLLEPYGMGNPIPKLLIQDCWFENAWHNNPKDLRGKKIQYI
KTTFQLRDNSVNEGFPGVWWGHYKDELPQNTSSDALVELDYNLYEKRYEVRLLAVRPHTP
DHYLNSRLPNTDILIDWRNQPAIDSSQPVRILQKCPTSWDEIQQEYRRAIALSSKLALAY
PPPQPLSPEQTWEKLVGMAKYLSRRGQTTTLRQMQEQLNLSRYSLNIGLQALSESGFHCH
SHQGTLEISHSCESFPESDAAIYQFFSAVEEEQFIHQYFSRIPLSVLQNLLEQTPINFDI
F
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgcttcctcatcctcaatggcaaatcctaacccctgtagaaattccccgatggtttcaa
gagatagtcaagggttatactcgcaactcagatgggttaatggctgcacaattattatgg
caaagaggcataactgaccccctgcaactgccgggttttttagacccagatgcttatcag
cctagcagcccctttgcctttggtcaagaaatgaaatgggccgttcaacgtctccaacag
gcactctctagcggcgaaaaactcacgatttggggagatttcgatgccgatggcatcacc
gccaccagtgttttatgggaaggactcggagaattttttcctcaatatcttcaactggat
tattacatccccaaccgctttagcgaatctcatggcttaaactgttcgggtatagaccgc
ctggcaagacagggaacccgcttaattatcacctgtgacaccggtagtaccaacctcacc
gagatagaatacgccaatcaattaggtattgatatcattattagcgaccatcacacctta
ccccaagaccgtcctcccgttattgccattattaaccctcgctattttgactcctctcat
cctctttttcatctttctggtgtggctgtcgcctataaattagttgaagcactatatcaa
acgttacccgatttgccgaaaaatccgctcttaaatttattggacttagtagctatagga
ttaattgctgatttagtacaactcgtcggagactgccgctatttagcgcaacgcggcata
caaaaacttcaacagcaactcaaaaaccccactcgtccaggaattgcccgtctcctagaa
ttatgtcaaagaagcggcgatcgtcctactgatatttcttttggtttagggccaagaatt
aacgccgttagccgcatacaaggagatgcgactttttgtgtggaattactcaccagtaaa
gatagccagcgctgtcaaaaattagccttagaaaccgaattagccaacacccgccgtaaa
gccttacaaaaagagatcaccgcacaagtccaaaaaaaactctctcagttagatctctct
accactcatgtgattgttttagaagaccctcagtggcaaagtggggttttaggattagta
gccggacaaattgccactgaatataaccgtcctaccattttattaacccctggagatgaa
gaaaatgccgataatgccgcctctttagcgaaaatagcgagaggttctgcgcgttcagtt
aatcatattgatttgtatcaattagtggcttctcagtctcatttattacatcgttttggc
ggtcatcctctggcagccgggttaagtttacccgtagaaaatatttccctgtttcgagat
ggaattaatcaacaactgcggcaacaacatggagatttagctttacggggtccggtcata
gaagctgacttggtggtgagtgttgctgagttgggaaaggccctattttgggagttaaag
cttctcgaaccctatggaatgggaaatcctattcctaaattactgattcaagattgctgg
tttgaaaacgcttggcataataaccctaaagatttaagaggaaaaaaaattcaatacatc
aaaaccacctttcaactcagggataattccgtcaatgaaggatttcctggtgtctggtgg
ggacattacaaagacgaattgcctcaaaatacctcctctgatgccctggttgaactcgat
tataatctctatgaaaagcgttatgaggtgcgcttgctggcggttcgtcctcatactccc
gaccattatcttaatagccgtttaccaaatacagatatactcatcgattggcgaaatcaa
cctgctatagactcctcacaaccggtcagaattctgcaaaaatgtcccacctcttgggat
gaaattcaacaggaatatcgacgggccatcgcactttcttctaaacttgctcttgcttac
cctcctcctcaacctctatctcctgagcaaacttgggaaaagttagtcggtatggctaaa
tatctcagtcgtcggggtcaaacaacaaccctcagacaaatgcaagagcaattaaattta
agccgctattcccttaatattggtttacaggctttgtctgagtccggttttcattgtcac
agccatcagggaacccttgaaatcagccactcttgtgagagttttcccgaatctgatgct
gccatttatcaatttttttcggcggtagaagaagaacaatttatacatcagtatttttcc
cgaattccgctttctgttcttcaaaatttactcgaacaaacaccgataaattttgatatt
ttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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