KEGG   Citrobacter youngae: CD187_09890
Entry
CD187_09890       CDS       T05526                                 
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
cyo  Citrobacter youngae
Pathway
cyo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cyo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CD187_09890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cyo03400]
    CD187_09890
Enzymes [BR:cyo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CD187_09890
DNA repair and recombination proteins [BR:cyo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CD187_09890
    RecFOR pathway proteins
     CD187_09890
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 Mg_chelatase AAA_3 AAA_16 Rad17 nSTAND3 AAA_14 TIP49 AAA_18 AAA_2 RNA_helicase AAA_17 NTPase_1 NB-ARC AAA_24 AAA_28 Bac_DnaA DUF4129 TsaE ABC_tran Sigma54_activ_2
Other DBs
NCBI-ProteinID: AWV26520
Position
2022814..2023824
AA seq 336 aa
MIEADRLISAVSTTPEDLVDRAIRPKLLEEYIGQPQVRSQMEIFIQAAKLRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLQHIVGRSARFMGLEMSDEGALEVARRARGTPRIANRLLRRVRDFAEVKHDG
TISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPQMP
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgattgaagcagatcgcctgatttcggctgtcagcactacccctgaagatctggtggat
cgtgcgattcgcccaaaattgctggaagagtatattggccagcctcaggtccgttcgcaa
atggagatttttatccaggcggcgaagctgcgcggtgatgctctcgatcacctgctgatt
ttcggtcctcctggtcttggtaaaactacgcttgccaatattgtcgccaatgaaatgggc
gttaatctgcgcaccacgtccggtccggtactggaaaaagcgggtgacctggcggcgatg
cttaccaaccttgaacctcacgatgtgctgtttatcgatgaaattcatcgtctgtcaccg
gtggtggaagaggtgctgtatccggcgatggaagattatcagctggatatcatgattggt
gaagggccggctgcccgttcgattaagatcgatctgccgccgttcacgctaatcggggcg
acgacgcgcgccgggtcgttaacctctccgctgcgtgaccgttttggtattgtgcagcgc
ctggaattctatcaggtggctgacctgcagcacattgtaggacgcagtgcgcgttttatg
ggcctggaaatgagcgatgaaggcgcgctggaagtggcacgccgcgcccgcggtacgccg
cgtatcgccaaccgtttattacgccgggtacgcgatttcgctgaagtgaagcatgacggc
acgatttcggctgatattgccgcccaggcgctggatatgctcaatgtggatgcggaagga
ttcgattatatggaccgtaagctgctgctggcggttatcgataaattctttggcggaccg
gtaggactggataacctggcagcggcgattggggaagagcgtgaaaccattgaggacgtg
ctggagccgtatctgattcagcaaggttttctacaacgtacgccgcgtggacgtatggca
accgtgcgcgcctggaaccattttggcattacaccgccacagatgccttaa

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