KEGG   Citrobacter youngae: CD187_10020
Entry
CD187_10020       CDS       T05526                                 
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
cyo  Citrobacter youngae
Brite
KEGG Orthology (KO) [BR:cyo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cyo03009]
    CD187_10020
Enzymes [BR:cyo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     CD187_10020
Ribosome biogenesis [BR:cyo03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    CD187_10020
SSDB
Motif
Pfam: Methyltr_RsmB-F YebU_pre-PUA_dom Methyltr_RsmF_N Methyltranf_PUA Methyltransf_31 Methyltransf_25 Methyltransf_23 Ubie_methyltran PCMT TRM
Other DBs
NCBI-ProteinID: AWV26546
Position
complement(2046076..2047497)
AA seq 473 aa
MAYFPDAFLTQMREAMPSTLSFDEFLAACQRPLRRSIRVNTLKISVADFLALTAPYNWSL
TPVPWCAEGFWIERDDEESVPLGSTAEHLSGLFYIQEASSMLPVAALFAEGNTPERVMDV
AAAPGSKTTQIAAKMNNRGAILANEFSASRVKVLHANISRCGIANVALTHFDGRVFGAAL
PESFDAILLDAPCSGEGVVRKDPDALKNWSVESNLEIAATQRELLDSAFHALRPGGTLVY
STCTLNRDENENIMQWLIETYPDAVEFLPLGDLFPQAERALTPEGFLHVFPQIYDCEGFF
VARLRKTAAIPALPAPKYKVGNFPFSPLKGRESALVTQAASACGLQWEDNLRLWQRDKEI
WLFPTEIEPLIGKVRFSRLGIKLAETHNKGYRWQHEAVIALADPNHSHAFELTLAEAEEW
YRGRDVYPQTAPTSDDVLVTFQHQPIGLAKRIGSRLKNSYPRDLVRDGKLFTG
NT seq 1422 nt   +upstreamnt  +downstreamnt
gtggcttattttcccgacgcctttctgactcaaatgcgtgaagcaatgccttccacgctc
tcattcgatgaatttctcgctgcctgtcagcgcccgttgcgccgcagcattcgcgtcaat
acgctgaaaatctccgttgccgatttcctcgcgctgacagcaccttacaactggtctctc
accccggttccctggtgtgctgaaggcttttggatcgagcgcgatgatgaagagtcagtg
ccgctcggcagcaccgcagaacatttaagcggcctgttttatattcaggaagccagttca
atgctgccagtcgcagcactgttcgccgaaggcaataccccggaacgcgtaatggatgtt
gcggcagcccccggctccaaaaccacgcaaattgccgcaaaaatgaataatcgaggcgcc
attctggcgaatgagttttctgccagtcgcgtcaaagtcctgcatgccaatatcagccgt
tgcgggatagccaacgtcgccctgacccattttgacggacgcgtatttggcgctgcgttg
ccggaatcatttgatgccatattgctcgacgcaccgtgttccggtgaaggcgtggtgcgt
aaagaccccgatgcgctaaaaaactggtctgtagaaagtaatctggaaattgccgcaacc
cagcgcgaactgctcgacagcgccttccacgccctgcgtcccggtggcacattggtttac
tcgacctgtacgcttaatcgtgacgaaaatgaaaatatcatgcagtggttgattgagacc
taccctgatgccgtcgagtttttacctctgggcgatttatttccgcaggccgaacgcgcc
ctgacgccggaaggattcctgcatgtattcccgcagatttacgattgcgaaggtttcttc
gttgcgcgtttacgcaaaacagctgcaatccctgcactacctgcgccgaagtacaaagtc
ggtaacttcccgtttagcccgcttaaaggacgcgaatctgcgcttgtcacgcaagccgcg
agcgcttgtggactgcagtgggaagataatttgcgcctgtggcagcgcgataaagagatc
tggctgttcccgactgaaattgaacctctgattggcaaggttcgcttttctcgactcggg
atcaaactggccgaaacccacaataaagggtatcgctggcagcatgaggccgttatcgcc
ctcgccgacccgaaccacagccatgcattcgaactgacccttgccgaagcggaagagtgg
tatcgcggtagagatgtttacccgcaaaccgcaccgacgagtgacgacgtactggttacg
ttccagcatcagccgatcggtctggcaaaacgcattggatcgcgactgaagaatagttac
ccgcgcgatcttgtccgggatggcaaactctttacgggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system