KEGG T05526: CD187

Citrobacter youngae: CD187_13465

Entry

CD187_13465       CDS       T05526

Name

(GenBank) phenylalanine--tRNA ligase subunit beta

K01890

phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]

Organism

cyo Citrobacter youngae

Pathway

cyo00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:cyo00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CD187_13465
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cyo01007]
    CD187_13465
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cyo03016]
    CD187_13465
Enzymes [BR:cyo01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     CD187_13465
Amino acid related enzymes [BR:cyo01007]
Aminoacyl-tRNA synthetase
  Class II (U)
   CD187_13465
Transfer RNA biogenesis [BR:cyo03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CD187_13465
Prokaryotic type
    CD187_13465

SSDB

Motif

Pfam:

B3_4 tRNA_synthFbeta FDX-ACB tRNA_bind B5 Glyco_hydro_106

Other DBs

NCBI-ProteinID:

AWV27174

Position

complement(2750580..2752967)

AA seq 795 aa
MKFSELWLREWVNPAIDSDALSNQITMAGLEVDGVEPVSGAFNGVVVGEVVECGQHPNAD
KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLPGDFKIKAAKLRGEPSEGMLC
SFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVA
VLNKAPLVEPEIAPVAATISDVLPIQVEAVEACPRYLGRVVKGINVKAPTPLWMKEKLRR
CGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGSEAKLNAD
TLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRY
ERGVDPALQHKAMERATRLLIDICGGEAGPVIDVTNEATLPKRATITLRRSKLDRLIGHH
IADEQVSDILRRLGCDVTEGQDEWKAVAPSWRFDMEIEEDLVEEVARVYGYDNIPNTPIQ
AGLIMGTHREADLSLKRVKTMLNDKGYQEVITYSFVDPKVQSLLHPGEEALLLPSPISID
MSAMRLSLWTGLLSTVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLMLAGVICGNR
HDEHWNLAKETVDFYDLKGDLEAVLDLTGKLADIQFKAEANPALHPGQSAAIYLKGERIG
FIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAREVSRFPANRRDIAVVVAENVPA
ADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAK
CVEALKERFQASLRD

NT seq 2388 nt +upstreamnt +downstreamnt
atgaaattcagtgaactgtggttacgcgaatgggtaaatccggcgattgatagcgatgcg
ctgtcaaaccaaatcacgatggcgggtcttgaagttgacggtgtggaacctgtttccggt
gcgttcaatggcgttgtggtaggtgaagtggttgaatgtggccagcacccgaacgctgac
aaactgcgcgtcaccaaagtgaatgtaggcggcgaccgcctgctggatatcgtctgcggt
gcgccaaactgccgtcaggggttgaaagtggctgtggcaaccgttggtgccgttctgccg
ggcgatttcaaaattaaagccgcgaaactgcgcggtgaaccatctgaaggcatgctgtgc
tcgttctccgagctgggtatttccgacgatcataacgggattatcgaactgcctgccgat
gcgccaattggcaccgatatccgtgaatacctgaagcttgacgacaacaccatcgaaatc
agcgtcacgccgaaccgcgccgactgcttaggcatcatcggtgtagcgcgtgatgttgct
gtactgaacaaagccccgctggttgagccggaaatcgcgccagtagccgcgaccattagc
gacgtcctgccgattcaggttgaagccgtggaagcctgcccacgctatctgggccgcgtg
gtgaaaggcatcaatgttaaagcgccgaccccgctgtggatgaaagaaaaactgcgccgt
tgcggtattcgttctatcgatgccgtggttgacgtgactaactatgtgctgctcgaactg
ggccagccgatgcacgcattcgacaaagaccgcattgaaggcggaattgttgtccgtatg
gcaaaagagggtgagaccctggtattgctggacggcagcgaagcgaagctgaatgcagat
acgctggtgattgcggaccacaacaaagcgctggcgatgggcggcatctttggtggcgaa
cattccggtgtgaacgatgaaacacaaaacgtcctgctggaatgtgcattcttcagcccg
ctgtctattaccggtcgcgcgcgtcgtcacggcctgcacaccgatgcatctcaccgctat
gagcgtggtgtcgatcctgcgctgcaacataaggccatggaacgtgcaacgcgcctgctg
attgatatctgcggcggtgaagcgggcccagtcattgacgtgacgaacgaagccacgctg
ccaaaacgcgcaaccattacgcttcgtcgtagcaaactggatcgtctgatcggacaccat
attgccgatgagcaggtgagtgacattctgcgtcgtctgggttgtgacgtgacggaaggg
caggatgagtggaaagcggtcgcgccgagctggcgtttcgatatggaaatcgaagaagac
ctggtcgaagaagtcgcccgcgtatacggttatgacaatatcccgaacacgccgattcag
gcgggtcttatcatgggtacgcatcgtgaagcggatttgtcgctgaaacgtgtaaaaacc
atgctgaatgacaaaggctaccaggaagtcattacctatagcttcgtcgacccgaaagtc
cagtcgctgctgcacccgggtgaagaagcgctgctgctgccaagcccaatctctattgat
atgtcggcaatgcgtttgtccctgtggaccggcttgctgtctacggtagtgtataaccag
aatcgtcagcagaaccgcgtacgtattttcgaaacgggtttacgtttcgtgccagatacg
caggccaacctcgggatccgtcaggatctgatgctggctggcgtgatctgcggtaaccgt
catgatgaacactggaatctggcaaaagagaccgttgatttctatgatctgaaaggcgat
ctggaagcagttctcgacctgacaggcaaactggcagacattcagttcaaagctgaagcg
aatccagcactgcatccgggtcagtctgcggcgatttatctgaaaggtgaacgtattggt
ttcattggggttgttcatcctgaactggaacgtaaactggatctgaacggtcgcactctg
gtgtttgaactggagtggaataagctcgcagaccgcgtggtgcctcaggcgcgtgaagtt
tctcgcttcccagcgaaccgtcgcgatatcgcagtcgttgtggcagaaaacgttcccgct
gcggatattttatccgagtgtaagaaagttggcgtaaatcaggtagttggcgtaaactta
tttgacgtgtaccgcggtaagggtgttgcggagggctataagagcctcgctatcagcctg
atccttcaggataccagccgtacacttgaagaagaggagattgccgctaccgtcgccaaa
tgtgtagaggcattaaaagagcgattccaggcatcattgagggattga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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