KEGG   Citrobacter youngae: CD187_19405
Entry
CD187_19405       CDS       T05526                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cyo  Citrobacter youngae
Pathway
cyo03030  DNA replication
cyo03430  Mismatch repair
cyo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cyo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CD187_19405
   03430 Mismatch repair
    CD187_19405
   03440 Homologous recombination
    CD187_19405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cyo03032]
    CD187_19405
   03400 DNA repair and recombination proteins [BR:cyo03400]
    CD187_19405
Enzymes [BR:cyo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CD187_19405
DNA replication proteins [BR:cyo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CD187_19405
DNA repair and recombination proteins [BR:cyo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CD187_19405
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 vATP-synt_AC39
Other DBs
NCBI-ProteinID: AWV29249
Position
complement(3943320..3944048)
AA seq 242 aa
MSTGITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDP
EAFGVHGIADEFLLDKPTFADVADEFLDYIRGAELVIHNASFDIGFMDYEFAKLKRDIPK
TNEFCKITDSLALARKMFPGKRNSLDALCSRYEIDNSKRTLHGALLDAQILADVYLMMTG
GQTTMAFSMEGDSQQQNDTGIQRIVRQSSKLRVVFATDEELAAHESRLDLVQKKGGSCLW
RA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgagcactggaattacacgacagatcgtcctcgataccgaaaccaccggtatgaaccag
attggcgcccactatgaaggccacaagatcattgagatcggtgcggttgaagtggtgaac
cgccgcctgaccggcaataacttccacgtttacctgaagccggatcggctggtggacccg
gaagcgttcggcgtacacggaatcgcagacgaattcctgctcgataaacctacgtttgcc
gatgtagccgacgagtttctcgactacattcgcggcgcggagctggtcattcataacgca
tcgttcgatatcggctttatggattacgaattcgcgaagctcaagcgtgatattccgaag
acgaatgaattttgcaaaataaccgatagcctggcgctggcgaggaaaatgtttcctggc
aagcgaaacagccttgatgcgttatgctcgcgctatgagatagacaacagtaaacgaacc
ctgcacggcgcattgctcgatgcccagattctggccgacgtttatctgatgatgaccggc
gggcagaccacgatggcgttctcaatggaaggcgacagccagcagcagaatgacacgggg
atccagcgtattgtgcgacagtccagcaaactacgcgttgttttcgctactgatgaagag
ttagcggcccatgagtcacgccttgacctggtgcagaagaaaggcggaagttgcctctgg
cgggcatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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