KEGG   Rippkaea orientalis PCC 8801: PCC8801_4132
Entry
PCC8801_4132      CDS       T00806                                 
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
cyp  Rippkaea orientalis PCC 8801
Brite
KEGG Orthology (KO) [BR:cyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cyp03021]
    PCC8801_4132
Transcription machinery [BR:cyp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PCC8801_4132
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 DivIC
Other DBs
NCBI-ProteinID: ACK68064
UniProt: B7K611
Position
complement(4336454..4337707)
AA seq 417 aa
MPATPFYSDTDYYSPLASDGNASSVGFSEKAYELREGSLELELHGIDFTEAEKNHHQGST
DLVRLYLQDIGRVPLLNQEEEVIKAQQVQSYVELLDLRQKAAQAGDRAIQQLIEMAEIHD
RLFISLGYRPSWDRWAKAAQISVGELKTILGQGKERWAQLADIELDQLETIEKVGIRAKE
QMIKANLRLVVSVAKKYQHRGLELLDLIQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQ
GITRAISTQSRIIRLPVHITEKLNKIKRAQRKLSQEKGRKATIEEMSKELDMSAEQIREV
LLRIPRSVSLEVKVGKEKDTELVDLLETECQSPEESLISESLRKDLQVLLEDLTEREQDV
IKLRYGFEDGTCYSLADIGRVLELSRERVRQIEAKALQKLRQPRRRNQIRDYFESLT
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgccagccacaccattttattctgacaccgattattattctcccttggcatctgacgga
aatgcttcttccgtcgggttttctgagaaggcttatgaattacgggagggttccttagaa
ctggaactacatggaatagactttacagaagccgaaaaaaatcaccaccaaggtagtaca
gatttagtgagattataccttcaagatattggtcgagttcctctactcaaccaagaagaa
gaagtgatcaaagcgcaacaagtccaaagctacgtcgagttattagatttgcgtcaaaag
gcggctcaagcaggggatagagccattcaacaattgattgaaatggcagaaattcacgat
cgcttgttcattagtctcggctatcgtccatcttgggaccggtgggcaaaggctgcacaa
atctccgttggggaattgaaaacgattctaggacaaggaaaagaacgctgggctcaactg
gccgacattgagctagatcaactcgaaacgattgaaaaagtcgggattcgcgcgaaagaa
cagatgatcaaagccaatttgcgtctagtggtgtctgtggccaaaaaatatcaacatcgt
gggttagaactcctcgacttgattcaagaaggaaccctagggttagaacgagcagtcgaa
aagtttgatcccactaaaggatatcgcttttctacctacgcttattggtggattcggcag
ggcattactagagcaatctccacccaaagccgtattattcgacttccggtgcacatcacc
gaaaaactcaataaaattaaacgagcccagagaaagctttcccaagaaaaagggcgcaaa
gcgactatcgaagaaatgtccaaggaattggatatgagtgccgagcaaattagggaagtg
ttgctgcgcattcctcgctcagtctccttagaggtgaaagtcggtaaagaaaaagatacg
gaattagtagacctattagaaaccgaatgtcaatcccctgaagaaagtttaatcagtgaa
tccctacggaaagatttgcaagtccttcttgaagatctcacggaacgagaacaggacgta
attaagctgcgctacgggttcgaggatggaacttgttactccttagccgatattgggcgt
gtcctagaattgtcccgtgagcgcgtgcgtcaaattgaagctaaggcactacaaaagtta
cgccaaccgcgacgacgcaatcaaattcgggattattttgaatccctaacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system