KEGG   Crocosphaera subtropica: cce_1873
Entry
cce_1873          CDS       T00686                                 
Symbol
sigC
Name
(GenBank) group 2 sigma-70 RNA polymerase sigma factor C
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
cyt  Crocosphaera subtropica
Brite
KEGG Orthology (KO) [BR:cyt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cyt03021]
    cce_1873 (sigC)
Transcription machinery [BR:cyt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     cce_1873 (sigC)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 tRNA_bind_2 DivIC Sigma70_r4_2 SelB_WHD3 Stonustoxin_helical
Other DBs
NCBI-ProteinID: ACB51223
CyanoBase: cce_1873
UniProt: B1X0D4
Position
1899844..1901106
AA seq 420 aa
MLATSSYHDIDNHDSSPVRPVTETDSDTESNEITSELGDDLLELELQSIDFTETDPSTNR
VTTDLVRLYLQDIGRVPLLKKEEEVSKSKQVQRYVELLDIRNQAAEADDPIMGQFVKVHS
IHDQLMAYLGHRPSWEKWAKASEVSVFELKEILAQGKQQWATLANIDIQELEEIQKSGIR
SKDEMIKANLRLVVSVAKKYQHRGLELLDLIQEGTLGLEKAVEKFDPIKGYRFSTYAYWW
IRQGITRAIATQSRIIRLPVHVTEKLNKIKQVQRQISQAKGRNATLEEIGKELNMTPTQV
REVFMKIPRSVSLEIKVGKEKDTELVDLLESEDISPEENLAIESLRRDIGILLEDLTERE
QEVIKLRYGFEDGVSYSLADIGRTLDLSRERVRQIEAKALQKLRQPRRRNQIRDYFESLT
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgttagccacatcttcttatcacgatattgataaccatgattcttctccagttcggcct
gttacagagacagactcagacacagaaagtaacgagatcactagcgagttaggggatgat
ttgcttgaactagaattacaaagcatagacttcacagaaaccgatccctcaactaatcga
gtgactacggatttagtccgtttatatcttcaagatattggtcgggttcccttattaaaa
aaagaagaagaagttagtaaatctaaacaagttcaacgctatgttgaattactagatatc
agaaaccaagcagcagaagcagatgatccgatcatgggtcaatttgttaaagttcacagt
attcatgatcaattaatggcctatttaggtcatcgtccctcctgggaaaaatgggcaaaa
gccagtgaagtttcagtatttgaattaaaagaaattttagcccaaggaaaacaacaatgg
gctactttagctaatattgatattcaggaattagaggaaattcaaaagtcaggaatccga
tccaaagatgaaatgattaaagctaatttacgtctggtggtttctgtggctaaaaagtat
caacatcgagggttagaattactagatttaatccaagaaggaaccctcggattagaaaaa
gccgttgaaaaatttgatcccattaaaggatatcgtttttctacctatgcttattggtgg
attcgtcaaggaattactagggcgatcgctactcaaagtcgtattattcgtcttcctgtt
catgtgacagaaaaactcaataaaattaaacaagttcaacgacaaatttcccaagcaaaa
ggtcgcaatgctaccctagaagaaattggtaaagaactgaacatgacaccgacacaggtt
cgagaggtgttcatgaaaattccccgttcggtttctttagaaattaaagttggcaaagaa
aaagatacagaattagtggatttattagagtcagaagatatttctccagaagaaaattta
gccattgaatctttgcgtcgagatatcgggattttattagaagacttaacggaaagagaa
caggaagtcataaaattacggtatgggtttgaagatggggtttcttattctttagctgat
attggccgaaccttagatttatcaagagaacgagttcgccaaatcgaagctaaagcttta
caaaagttacgtcaacctcgaagacggaaccaaattcgagattattttgaaagtttgact
taa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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