KEGG   Candidatus Atelocyanobacterium thalassa: UCYN_02520
Entry
UCYN_02520        CDS       T01159                                 
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
cyu  Candidatus Atelocyanobacterium thalassa
Pathway
cyu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cyu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    UCYN_02520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cyu03021]
    UCYN_02520
   03400 DNA repair and recombination proteins [BR:cyu03400]
    UCYN_02520
Enzymes [BR:cyu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     UCYN_02520
Transcription machinery [BR:cyu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     UCYN_02520
DNA repair and recombination proteins [BR:cyu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      UCYN_02520
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF1246
Other DBs
NCBI-ProteinID: ADB94997
UniProt: D3ENE7
Position
complement(274270..274506)
AA seq 78 aa
MLKKYSFDSSQIMYCSQELLDAAPNRYRITVQVATRAKRRRYEEFDNIDNAHMKPAVRAI
IEMSDELNQPEIISDVRD
NT seq 237 nt   +upstreamnt  +downstreamnt
atgctaaaaaaatattcttttgattcttcccaaatcatgtactgttcacaagagctactt
gatgcggcacctaatcgttatcgtataacagtacaagttgctactagagcaaagcgtcgt
cgttatgaagaatttgataatattgataatgcccatatgaaaccagcagttcgggctatt
atcgaaatgtcagacgagctaaatcagccagaaatcatcagtgatgtaagagattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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