KEGG   Desulfurivibrio alkaliphilus: DaAHT2_0989
Entry
DaAHT2_0989       CDS       T01244                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
dak  Desulfurivibrio alkaliphilus
Pathway
dak03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dak00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DaAHT2_0989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dak03019]
    DaAHT2_0989
Messenger RNA biogenesis [BR:dak03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DaAHT2_0989
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 AAA_22 P-loop_SecA CMS1
Other DBs
NCBI-ProteinID: ADH85692
UniProt: D6Z2B7
Position
1185800..1187128
AA seq 442 aa
MTFNELGLRAELLRAVSESGYSQPSPIQSKAIPVVLQGGDLLAGAQTGTGKTAGFALPLL
QRLSEKPAQKSRPIRALVLTPTRELAAQVEASFRLYGKHLPLRTTVVFGGVSIRPQITTL
RQGVDILVATPGRLLDHVSQKTIDLSKVEMLVLDEADRMLDMGFLRDIRKILALLPIQRQ
NLLFSATFSDEIKRLADGLLKSPTLIEVARRNTAAEQVDQAIYRIDKGLKRALLSHLISG
QNWQQVLVFTRTKHGANRLAGQLAKDGISSTAIHGNKSQGARTRALADFKQGKVRVLVAT
DIAARGLDIEQLPHVVNYELPNVPEDYVHRIGRTGRAGCSGNAISFVCAEEHKQLHDIES
LLKRRIPLQEQEPGLTLTRSEVDTVRHRTPRRPATPAASRRQRTGGNRSTAARPDAGKAK
KPQPGANARSARPKAHYGSSPR
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgacgttcaacgaactcggcctgcgtgccgaactgctccgtgctgtatctgaatcgggc
tacagccaaccatcacccattcaaagcaaagccattcccgtggtgttgcaaggcggcgat
ctgctggccggtgcccagactggaaccggcaaaaccgccggctttgccctgcctttattg
cagcggttaagcgaaaagccggcccaaaaatcgcgcccgattcgggccctggtccttact
cccacccgcgagttggccgctcaggttgaagcgagtttccggttgtatggcaagcatctg
ccactgcgcaccaccgtggttttcggcggggtcagcatccggccacagatcacgacattg
cgccaaggggtcgacattctggtggccactcccggccgtctgcttgaccacgtcagccag
aagaccatcgatctgtcgaaggttgagatgctggtgctggatgaagcggaccggatgctc
gacatgggctttctccgcgacatccggaaaattcttgccctgctgccgattcagcgccag
aatttactgttttcagctaccttttccgacgagatcaagcgcctggccgatggcctgctg
aaatcaccgacgctgattgaggtcgccaggcgcaataccgctgccgagcaggttgatcag
gcaatttaccgaatcgacaaaggtctcaagcgggccctgctctcgcatttgatttccggg
caaaactggcagcaggtactggtctttacccgcaccaagcatggggccaatcgtcttgcc
ggccaacttgccaaggatgggatttccagcacggcgattcacggcaacaagagccagggg
gccagaaccagggcgctggccgacttcaagcagggcaaggtgcgggtgctggtggccacc
gatattgccgcgcgcggcctcgacattgaacagttgccccatgttgtgaactatgagctg
cccaatgtgcccgaggattatgtccaccgcattggccgtaccggccgcgccggttgctcg
ggcaatgccatctcttttgtctgtgctgaagagcacaaacaactgcacgacatcgagtct
ctgctgaaacgccggattccactgcaagaacaggaaccggggctgacactgacccgatcc
gaggtggacaccgtgcgtcacagaacccccagaaggccggcaacaccggcggcgagccgg
cgccaacggaccggcggcaaccgcagcaccgcagcccgaccggatgcaggtaaagcaaaa
aaaccacagcccggcgccaatgctcggagtgcacgacccaaagcacattacggcagttcg
ccaagataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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