KEGG   Desulfatibacillum aliphaticivorans: Dalk_4110
Entry
Dalk_4110         CDS       T00813                                 
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
dal  Desulfatibacillum aliphaticivorans
Pathway
dal03030  DNA replication
dal03430  Mismatch repair
dal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Dalk_4110
   03430 Mismatch repair
    Dalk_4110
   03440 Homologous recombination
    Dalk_4110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dal03032]
    Dalk_4110
   03400 DNA repair and recombination proteins [BR:dal03400]
    Dalk_4110
Enzymes [BR:dal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Dalk_4110
DNA replication proteins [BR:dal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Dalk_4110
DNA repair and recombination proteins [BR:dal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Dalk_4110
SSDB
Motif
Pfam: DNA_pol3_beta_3 DNA_pol3_beta DNA_pol3_beta_2
Other DBs
NCBI-ProteinID: ACL05795
UniProt: B8FM62
Position
5160830..5161960
AA seq 376 aa
MQFSISKEIFLDGITKVQGIAGRKTTFPITANVLISAQGSTITLVATDLEIGFKGHYPAT
VEEEGTITIPGKKLFEIVREFPHGAIDVRDLENGWVQIFKDKVQYKIVGMDPNDFPKLPE
VEGMELFELDSLVFADMIEKTNLSGGMSSEEKRPHLIGVYLEKIVQEEKNGLRMVSTDGN
RLARVDYIPDEGMQPPAFDGAKGVILPKKVMTEILRVSEGGGKISLGVQKNYFVIQKEAE
TIIGRLVEGEYPDYNLVIPNDLETFFEIEKQPFVSILKRMSILCSERYRAVRFKVDPQRL
EVSVNNPELGDSNEEMPIAFNGGAFEAAFNPRFFVDALNPMKSDMIKVNILDSSKPCILE
GSEDPRYLSVIMPMRM
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgcagttttcaatcagcaaggaaatctttctggacggcataacaaaagtgcagggaatc
gcgggtagaaaaaccaccttccccatcacagccaatgtgcttatctctgcccagggctcc
accatcaccttggtggccactgatttggaaatcggttttaaaggccattatccagccacc
gtggaagaagaaggcactatcaccattccgggaaaaaagctgtttgagatagtcagggag
tttccccacggcgccatagatgttcgggacctggaaaacggctgggtgcagatcttcaag
gacaaggtccaatacaagatcgtcggcatggatcccaatgactttccaaaactgcctgaa
gtggaagggatggagctttttgaactggattccctggtgttcgccgacatgatcgaaaaa
accaatctgtccggcggcatgagttcagaggaaaaacggccccatctcataggcgtgtac
ctggaaaaaatcgtccaggaggagaaaaacggcctgcgtatggtttccacagacggcaac
cgcctggccagggtggactatataccggacgaaggcatgcagccgcctgcttttgacggc
gccaagggagtcatcctgccgaaaaaggtgatgaccgaaatccttcgggtgtcggaaggc
ggaggaaagataagccttggggtgcagaagaactatttcgtcattcaaaaggaggccgaa
accatcatcggcagactggtggaaggggaatatcccgactataatctggtcatccctaat
gatctggaaacttttttcgagattgaaaagcagccttttgtttccattttgaaaagaatg
tctatcttatgttctgagcgttacagggccgtccgattcaaggtggatccccagcgcctg
gaagtaagcgtgaataacccggaattgggagattccaacgaagaaatgcccattgctttt
aatggcggggcatttgaagcggcctttaacccccgtttttttgtggacgctttaaatcct
atgaaaagcgacatgatcaaggttaatatcctggactccagcaagccctgcattctggaa
ggctctgaagatccgagatatctgtccgtcatcatgcccatgagaatgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system