KEGG   Desulfatibacillum aliphaticivorans: Dalk_5175
Entry
Dalk_5175         CDS       T00813                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
dal  Desulfatibacillum aliphaticivorans
Brite
KEGG Orthology (KO) [BR:dal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dal03016]
    Dalk_5175
Enzymes [BR:dal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     Dalk_5175
Transfer RNA biogenesis [BR:dal03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Dalk_5175
 Prokaryotic type
    Dalk_5175
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B
Other DBs
NCBI-ProteinID: ACL06845
UniProt: B8FE64
Position
complement(6377959..6378966)
AA seq 335 aa
MRAAIRPRLVNPDPFDDPGLFIHFAFVKRAILFDLGDLHALSPKDILKITHVFVSHTHVD
HFIGFDHLLRICLGRDKIIHMFGPEGIIANTAGKLQGYSWNLLENYESEFGFRVTEVHED
RLETCNFTTLGEFKPTPREVVRNHGGLLLTEPDFTVEAKILDHGMPCLGFALNERFHVNI
LKARLEELGMDVGPWLREFKQSLYASKDWSEPFTVPMPEGKDKSFTLAELAEAVTLITPG
QKIAYITDVAGHADNQKKILALAENADQLFIEASFADEDAEHAVARNHLTAGQAGELAKT
AKARQMINFHISPRYQEEPELILEQARQAFETQGE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagagcggcgattcgcccccggctcgtcaatcccgatccttttgacgatcccggcctt
tttattcattttgcgtttgtcaaacgcgccattctatttgacctgggcgacctgcacgct
ctatcccccaaagacatcctaaaaatcacccatgtttttgtgagccacacccacgtggat
cactttatcgggtttgaccacctattgcgcatttgcctggggcgggacaaaatcattcac
atgttcggccccgaaggaatcatcgcaaacaccgccggaaagctccagggttatagctgg
aacctgctggagaattacgaaagcgagtttggattccgggtcacggaagtccatgaagac
cgtctggaaacctgcaattttacaaccttgggggagttcaagcccacgcccagggaagtc
gtgcggaaccatggaggccttcttttaacggagccggactttaccgtggaagcaaaaatc
ctggatcacggcatgccctgccttggattcgccctgaacgaaaggtttcatgtaaacatc
ctgaaagccaggctggaggaattgggcatggatgtggggccctggctgagagagttcaag
caatccctgtatgcatccaaggactggtccgaaccgttcaccgtccccatgcccgagggg
aaggacaagtccttcaccttggcggaactggctgaggccgttacgctcataactccgggc
cagaaaattgcgtatattacggatgtcgcgggccacgcggataatcagaaaaaaatcctg
gccctggctgaaaatgcggaccaactgtttatcgaggcgtcgttcgccgacgaagacgcc
gaacatgctgtcgccagaaaccacctgacggccggacaggccggtgagttggcgaaaacg
gccaaggcccgtcagatgatcaacttccacatttcgcccagatatcaggaagagccggag
ttgatccttgaacaggctcgacaggctttcgaaacccaaggggagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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