KEGG   Desulfosarcina alkanivorans: DSCA_03850
Entry
DSCA_03850        CDS       T06544                                 
Name
(GenBank) hypothetical protein
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
dalk  Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:dalk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dalk03021]
    DSCA_03850
Transcription machinery [BR:dalk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DSCA_03850
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 HTH_20 HTH_8 TrmB HTH_28 HTH_30 HTH_24 HTH_Tnp_1_2 CENP-B_N Sigma70_r4 TetR_N HTH_23 HTH_10 HTH_IclR UBact HTH_5 HTH_psq HTH_11 UPF0122
Other DBs
NCBI-ProteinID: BBO66455
UniProt: A0A5K7YDE0
Position
complement(413657..414241)
AA seq 194 aa
MVSQNSYDGIDKYAADLIRHKARQLVGKAGFTEDDRPDLEQELMIDLLQRMRHFNPAKAK
KTTFMARIVERHISTILEARFAQCRDWRLCQTSLNEPLDNGEGDTTERIDFLDSEGSLGS
GPRETRERLTHEIRMDLDRAIASLPEDLRDLCVRLHDSTMAEIAREMGIPRTTLYDRLSK
LREAFIEAGLTDYL
NT seq 585 nt   +upstreamnt  +downstreamnt
atggtttcacaaaattcttacgacggcatcgacaagtatgccgccgacctcattcggcac
aaagcacgtcaactcgtaggcaaggccggattcaccgaggacgacagacccgacctcgaa
caggaactgatgatcgatctgctgcagcggatgcggcatttcaatcccgccaaggccaag
aagaccaccttcatggcccggatcgtcgaacgtcacatctccactattttggaggcccgg
ttcgcccaatgccgggactggcggctctgccaaacctcactcaacgaacccctcgacaac
ggcgaaggcgacaccaccgagcggatcgacttcctggacagcgaaggctctctgggaagc
ggcccccgcgagacaagggagcgtctcacccatgagatccgcatggatctcgaccgggcc
atcgcctcgctaccggaggatctccgggatctgtgcgtgcgcctacacgacagcaccatg
gccgaaatcgcccgggaaatgggcattcctagaaccaccctctacgaccggctgagcaag
ctgcgggaggcgttcatcgaggctggcctgacggactacctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (26)   

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