KEGG   Drosophila ananassae: 6498120
Entry
6498120           CDS       T01059                                 
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
dan  Drosophila ananassae
Pathway
dan03013  Nucleocytoplasmic transport
dan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6498120
  09122 Translation
   03013 Nucleocytoplasmic transport
    6498120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dan03019]
    6498120
   03041 Spliceosome [BR:dan03041]
    6498120
Messenger RNA biogenesis [BR:dan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     6498120
Spliceosome [BR:dan03041]
 Complex C
  Other components
   EJC/TREX
    6498120
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    6498120
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2 Chs7 FimA TPR_19 Cytochrom_B562
Other DBs
NCBI-GeneID: 6498120
NCBI-ProteinID: XP_001962116
FlyBase: FBgn0092332
UniProt: B3MJC7
Position
Unknown
AA seq 1641 aa
MRRLKKLKSVTGTQDGGGGGDGAEVRNTAGEKDANGGSGGAGSVGQEPGALNPEIFKHFD
KNGRNEFLKYLKSQLQDTAESPVYDSNGVFKQGVSHAIYELLWQALRFTHKKDLVLHLLT
EVVSLHEQLPSLIVDVVNILDSETSLMTEGLHEERHAFVLLVKDMDKVVPESLLKERLEI
DTLQEVGIVKNKSFYSKFIKVKTKLYYKQRRFNLFREESEGFAKLITELNQDFEDNTTPE
SIMDIIKSLIGCFNLDPNRVLDIIIESFETRPDRWQLFIPLLRSYMPTGAIICEVLGYKF
CHFKDSKTPRSLYHVCALLLKHGVIELNDVYVWLTPNDGSIKADWDEELADARELVRKLN
LISTNKKEDEKDPPPPPSVKKFDEEKYNVNQKFGLCEALLKVGDWENAYKIIQKLPEQAV
VLQEPIARGIADLIHLSVEHVYYKKVFKAPAGRKQSRSRLYDDSKLVAKMQAKDFSDLRK
YTWPMANVLGPAMHYDTVLMYKLIRIMSKLVIDMGVDSLNGPPPNTEAEQHYYDIMTSLD
ACILPSLLYLDNNCSMSEEIWAVLKYFPYHFRYSLYARWKNDSYQLHPNLIRRCGLAQRD
IKALMKRVSKENVKQLGRLVGKYSHCAPGLLFDYILLQIQIYDNLIGPVCDMLKYLTALS
FDCLGYCIIESLTLTGRLRFKDDGTSLSLWLQSLASFCGTIYKKYSIELSGLLQYVANQL
KSQKSLDLLILREIVHKMAGVESCEEMTNDQLQAMCGGEQLRGEAGYFSQVRNTKKSSNR
LKEALANNDLAVAICLLMAQQKHCVIYRETAAHSHLKLVGNLYDQCQDTLVQFGTFLGST
YSVDEYVERLPSIITMLREYHINTDVAFFLARPMFTHQINQKYDQLRKADPNAKKLTTVQ
KLQKYLEATQLIMNPIVESVRPLHSAKVWEDISPQFLVTFWSLSMYDLHVPTDSYQREIG
KLKQLAQQAAEGKDSNQSKNKKEQERYIALMEKLNDERKKQHEHVDKISQRLQEQKDSWF
LLRSAKSAKNDTITQFLQLCLFPRCTFTALDALYCAKFVHTIHNLKTSNFSTLLCYDRIF
CDITYSVTSCTEGEATRYGRFLCAMLETVMRWHADQAVFNKECANYPGFVTKFRVSNTFS
EANDHVGYENYRHVCHKWHYKITKAIVFCLDSKDFMQIRNALIILMRILPHYPVLGKLAQ
IIERKVDKVREEEKTKRPDLYVIASSYIGQLKLRSPHMLKESDFHQLADRANKESPPTGG
ASGGTPIKVLSTEKTSPISGSVQSAAAKQPGAATGFYANEAKPGNKDQDAKTVSLTRSDS
KNQKSDAISSNLVSISTSSTTDRESKQRELPAPRDSQSRNKDDQLEQTNGSSQRESRSRD
VDREKQDQHEQRHSSIASHRSSRDTVRAKPTEAEQHQRSRERSQRLEELEATQQRGLKRE
KSSRRGGGGEERHRHNEGVDVVVDLVGGNDHRHYEEYESRGVRDRDLSSVSNESNGSMQH
RQRSHETIEYEKADSKRRKLESSSSSSKKVEELVDSVKKARGLKTKDRNKDKLSEEERDA
RKDRKLGRKRDRAEDSNSGDHKRRREAQNGEEEGRDRERHRDKSPRERSHEKFDRERGGS
SRGEDRQYTISKSTRSSRVNY
NT seq 4926 nt   +upstreamnt  +downstreamnt
atgcggagactgaagaaactcaagagcgttaccgggacgcaggatggcggcggtggcggc
gatggagctgaagtccggaacacagctggagaaaaggacgcgaacggcggcagcggtggc
gccggtagtgtgggccaagagccgggcgccctcaatccggaaatcttcaagcatttcgac
aagaacggacgtaacgaattcctgaagtacctgaaaagtcaactgcaggacacagcggag
agtcccgtctacgacagcaatggtgttttcaagcagggcgtctcgcacgccatctacgag
ctgctctggcaggcgctgcgcttcacccacaaaaaggatctcgtcctgcacctactgacg
gaggtggtgtccctccacgagcaacttcccagcttgattgtggatgtggtgaatattctg
gacagcgaaacgtccttgatgactgaagggctgcacgaggagcgtcatgccttcgtgctg
ttggtcaaggacatggacaaggtggtgccggaaagtctcctgaaggagcgcttggaaatc
gacacgctccaggaagtgggcattgtcaagaacaagagcttctactcgaagttcatcaaa
gtcaaaacaaagttgtattacaagcagcgccgttttaatcttttccgcgaggagagtgaa
ggctttgcgaagctcattaccgagctgaatcaggactttgaagataataccactcccgaa
agcataatggatattatcaaatcgctcataggctgctttaatctggatcctaatcgtgtc
ctagacatcatcatagaatcgttcgagactcggcctgatcgctggcaattattcattccc
ctgctgcgcagctatatgcccaccggtgccataatttgcgaggttcttggctacaagttc
tgccatttcaaggattccaagacgccccgctctctctaccatgtctgtgccctgctgctg
aagcacggagtgattgaacttaacgatgtctatgtgtggttgactccgaatgatggtagc
attaaggcggattgggatgaggagctggccgatgccagggaattggtgcgaaagctaaat
ctgatatccaccaacaaaaaggaggacgaaaaggatccaccaccgccgccctcggtgaag
aaattcgatgaggaaaaatacaacgtgaatcaaaagtttggtctctgcgaggcgctgctt
aaagtgggcgactgggaaaatgcctacaaaatcatccaaaagcttccagagcaggcagtt
gtcctgcaggagccaatcgctcggggaatcgccgacttgattcatctgtcggtggagcac
gtctactataagaaggtcttcaaggcaccggctggtcgtaagcagagccgcagtcgcttg
tacgacgattccaagctagtggccaagatgcaggctaaggatttctccgatttgagaaag
tatacgtggccaatggccaatgtccttggcccagccatgcactacgataccgtgctcatg
tacaaactgatccgcatcatgagcaagctggtgattgacatgggcgtggacagtttaaat
ggcccgccacccaacacagaggcggaacagcactactatgacattatgacctcgttggat
gcgtgtattctgccctccctgctctatctggacaacaactgttccatgtccgaggagatc
tgggcggtgttgaagtacttcccgtatcatttccgctacagtttgtatgcgcggtggaag
aacgacagctatcagctgcatccgaatctgattcggcgctgtggactggcccagcgggac
atcaaagcgctgatgaagcgtgtcagcaaggagaatgtcaagcaattgggtcgtctagtg
ggcaagtacagtcattgtgcccctggactactctttgactatatccttttgcaaatccaa
atctatgacaatctcattgggcctgtgtgcgacatgctcaagtacttgactgccctctca
ttcgactgcctaggctactgcatcatcgagtcgctgaccttaacggggcgcctgcgtttc
aaggacgatggcacctccctgtccttgtggctgcagagcttggcctcattttgcggcact
atatataaaaagtatagcatcgaactgagtggccttctgcagtatgtggccaatcagctt
aaatcgcaaaagagcttggatctgctgatcctgcgggagattgtacataagatggcgggt
gtggaatcatgcgaggagatgaccaacgaccagctgcaggccatgtgcggcggtgaacag
ctcaggggagaggccggctacttcagtcaagtgaggaatacgaaaaagtcctcgaatcgt
ttgaaggaggccctggccaacaatgatctcgccgttgccatttgtctgctgatggctcag
cagaagcattgcgttatctaccgtgaaacggcggcgcacagccacttgaagttggtgggc
aacctgtacgatcagtgccaggacacattagttcagtttggcacttttctggggtccacc
tactcggtggatgagtatgtggagcgcctgccctcgatcataaccatgttgcgagagtat
cacatcaacactgatgtggccttcttcctggctagacccatgtttacgcatcagataaat
caaaagtacgatcagctacgtaaggcggatcccaatgcgaaaaagctaaccaccgtccag
aaactgcaaaagtatctggaggccacgcagctgatcatgaatcccattgtggagtcagtt
cggccgctgcacagcgccaaagtgtgggaggacattagtccgcagttcttagtcaccttc
tggagcctgagcatgtacgacttgcatgtgccgaccgatagctaccagcgcgagatcggt
aagctgaagcaactggcccaacaggccgccgagggcaaggactccaatcagtcgaaaaac
aaaaaggagcaggaacgctacattgccctgatggagaaactgaacgatgagcggaaaaaa
cagcacgagcatgtggacaagatctcgcagcgactgcaggagcagaaggatagctggttc
ctcctccgttctgccaaatccgccaagaatgacaccatcacccagttcctgcaactgtgc
ctcttcccgcgctgcaccttcactgccttggatgcactctactgcgccaaattcgtgcac
accattcacaacctcaagacatcgaacttctccaccctgctttgctacgatcggatcttc
tgtgacatcacgtactcggtaacatcctgcaccgagggcgaggcgacgcgttacggacga
ttcctgtgtgccatgctggagaccgtgatgcgatggcatgcggatcaggccgtttttaat
aaggaatgcgccaactatcccggtttcgtaaccaaattccgggttagcaacacattctcg
gaggctaacgatcatgttggatacgagaattatcgccatgtgtgccacaagtggcactac
aagatcaccaaggcgatagtattctgtctggattccaaggacttcatgcagatacgtaat
gccctaatcatcctaatgcgcatcctgccgcactatccggttcttggcaaactggcccag
atcatcgaacggaaggtggacaaggtgcgtgaggaggagaagacaaaacggccggatttg
tatgtcattgcctcgagctacattggccagctgaagctgaggagtccgcacatgctcaag
gagagcgatttccatcagttggccgaccgagctaacaaggaatcacctccgacgggtggt
gctagtggcggtacaccgatcaaggtgctttccaccgaaaaaacgtcacccatctcggga
tctgtacaaagtgcggcagcaaaacagccgggtgccgcaactggtttctacgccaatgaa
gccaaaccgggcaacaaagaccaggatgccaagacggtctctcttacgcgcagcgattcg
aagaaccaaaagagtgacgccatctcgtccaatctggtgtccatatcgacttcatccacc
acggatcgagagagcaaacaacgtgagctgccggcgccgcgggattcgcagtctcgcaac
aaggacgaccagctggagcagacaaatggaagcagccagagggagagtcgcagccgggat
gtggaccgcgagaagcaggatcagcacgagcagcgccacagcagcattgccagtcatcgc
agctcccgggacacggtgagggcgaagccaacggaggccgagcagcatcaacggtcgcgt
gagcgctcccagcgtttagaggaattggaggccacccaacagcgtggcctgaagcgtgag
aagagttctcgacgtggcggcggtggggaagagcgtcaccggcacaacgaaggcgttgat
gttgttgtggatctggtgggcggcaatgatcatcgccactacgaggagtacgagagtcgc
ggtgttcgggatagagatcttagttccgtatccaatgagagcaatggttccatgcaacat
cgccagcgcagtcacgagaccatcgagtacgaaaaagcagattccaagcgtcgcaagttg
gagtcatcgtccagcagttcaaagaaggtggaggaactggtggacagcgtgaagaaggcg
cgcggcctgaagaccaaagaccgcaacaaggacaagctgtcggaggaggagcgtgatgcc
cgcaaggatcgcaagctgggtcgtaagcgggatcgagctgaggactccaatagcggtgat
cacaagcgtcgtcgtgaagcacaaaatggcgaggaagaaggccgtgatagggagcgtcac
agggataagtcaccccgagagcgttcccacgagaagttcgaccgggagagaggtggaagt
tcacgtggcgaggatcgccagtacaccattagcaagtcaacccgctcctcgagggtcaat
tactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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