KEGG   Desulfobacca acetoxidans: Desac_2566
Entry
Desac_2566        CDS       T01454                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dao  Desulfobacca acetoxidans
Pathway
dao03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Desac_2566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dao03400]
    Desac_2566
Enzymes [BR:dao01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Desac_2566
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Desac_2566
DNA repair and recombination proteins [BR:dao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Desac_2566
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS zinc-ribbons_6 Auto_anti-p27 NFACT_N
Other DBs
NCBI-ProteinID: AEB10384
UniProt: F2NII2
Position
2844202..2845026
AA seq 274 aa
MPELPEVEVIRRGLAKKLVGDKIIAVDLGRQRLRRQALDSELASLVGHTFSRLTRRGKYL
LLHLDQGQTLLVHLAMTGRLLLQTNSCPLPPHVHLTLHCQTGHKLLYQDMRRFGQILLYP
PGKRPPALEQVGWEPFSRGLTPEWLRQKTVRLTRPVKNFLLDGRFIAGIGNIYASETLFE
ARVHPQTPVGRIDLKTWETLLRAIRRILRRAIKAGGTTIVNYVDCDGQSGLFGVQLKVYG
RAGSPCPVCQTPITRLVMAGRSTFFCPTCQPINL
NT seq 825 nt   +upstreamnt  +downstreamnt
gtgcctgaacttccggaagtggaggttatacgccgcgggttggcaaagaaactggtaggc
gataagatcattgccgttgatttgggtaggcagcgactgcggcgacaggccctcgatagc
gaactggcctcattggtggggcacacgttcagccggttgacccggcggggcaaatatctc
ctgctgcacctggatcaggggcagacgctgctggtacatctagccatgaccggacgcctg
ctcctgcaaacgaactcctgcccgctgccgccccacgtccacctcaccttacactgccag
accggtcataaactgctgtaccaggacatgcgccgcttcggccagatactcctctatcct
cccggcaaaaggccgccagctctggagcaggtaggatgggagcccttttcccggggctta
acccccgagtggctgcgccaaaagacggtgcgactaaccaggccggtgaaaaatttcctg
cttgacggccgcttcatcgccggcatcggcaatatctacgcctctgagacactctttgag
gccagggtgcaccctcagaccccggtgggccggatcgacctcaagacttgggaaactttg
ttgcgcgccatccgacgtatcctgcgccgggccatcaaggccggcggcaccaccatcgtc
aactatgtggactgcgacgggcaatcaggcctgtttggcgtgcagctcaaggtctatggc
cgggctggcagcccttgcccagtctgccagacccccattacccgcctggtcatggccggg
cgcagcaccttcttctgccccacctgccagccgatcaacctttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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