KEGG   Dickeya aquatica: DAQ1742_00505
Entry
DAQ1742_00505     CDS       T06021                                 
Name
(GenBank) Type I restriction-modification system, restriction subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
daq  Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:daq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:daq02048]
    DAQ1742_00505
Enzymes [BR:daq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     DAQ1742_00505
Prokaryotic defense system [BR:daq02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   DAQ1742_00505
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII Helicase_C
Other DBs
NCBI-ProteinID: SLM61600
UniProt: A0A375A6E9
Position
513286..516564
AA seq 1092 aa
MQHVPKFQEEYSAKIPALTLLTSLGWSYITPDQAQEARGNKLDQVVLSQILREQLQKRTF
TFAGRDYPLSDKAIDNLIAEVNSPALNEGLLTANERLYNHLMYGISVTEFIDSKKANPTI
ALIDWHNPVNNSFVFTEEFSVTRSNGIESRRPDIVCFVNGIPLAIIEAKRPDGNAKKGPT
LDEGISQSLRNQRHDEIPRLFAYSQLLLSINGHDGRYGTCGTPAKFWANWREEDISDAEM
YAIKNRSLSTEQFTALFSHRSQAIVDWYQQLITSGELAVTGQDKLLISLLSPVRLLEMTR
YFTLFDKKVGKVVARYQQVFGIKRLIERINTKRPDGGVQGGVIWHTTGSGKSFTMVFLSK
VLILHETLKQCRIVVVTDRIDLEKQLSRTFISGGELSGKRDKASAIATSGTRLAEQIGKG
TERIIFSLIQKFNTAIRLPGCVNTSSDIIVLIDEGHRSQGGENHIRMKQALPNAAFVAFT
GTPLLKDDKTTNKFGPIVHAYTMQRAVEDKTVTPLLYEERIPDLDVNERAIDSWFERITE
GLSDEQKTDLKRKFARKGQIYSTDDRIRLIALDIANHFDKNIDDGLKGQLACDSKVSAIK
YKKYLDEAGLFESAVVISSPDTREGNTEIDESTMPEVAQWWKENVGSQDEQVYTQHIIER
FDKDDSLKILIVVDKLLTGFDEPKNAVLYIDKPLKGHNLIQAIARVNRLHPKKKFGLLID
YRGILRELDTTIQDYQKLASRTQGGYDINDLVGLYGQMSTEYKRLPQLYKNLWAIFAGVK
NKNDTQQLRQVLIPRIEERNGELVDIHLRVREDFYEALTAFASCLKVALQSATFFEDKSF
SDDDRYHYKETVSQFSSLRQLVQQDAGERIDYDEYAAQVKKLLDKHVVGVEVREPDGVYE
VSQMGQFQQPEDWSDEKTRNETDIIKTRVTRMIEQQLRDDPYAQEAFSKLLRQAIEEAEK
LFDHPLKQYLLFREFEEQVQERRLNDIPDAFAGNQHAQAYFGVFRKILPEVFAIVDAQVQ
DKWVKLAFTLDQLVDVSVAENSINPQNIEADIRKKLLPMLFKECKAIGGGMDQAKKMVEM
IVQITRVGLSGV
NT seq 3279 nt   +upstreamnt  +downstreamnt
atgcaacatgtgccaaaatttcaggaagagtacagcgctaaaataccggcactaacatta
ctcaccagtcttgggtggtcatatattacgcctgatcaggcgcaggaggcacgtggtaat
aagttggatcaggtggtattaagccagattctgcgtgagcaattgcaaaagcgtaccttc
acttttgcaggacgggactatccgctctccgataaagcgattgataaccttattgccgaa
gtaaacagcccggctttgaatgaaggtttgctcaccgccaatgagagactctataaccac
ttgatgtacggtatttctgtcactgagtttattgatagtaaaaaggctaaccccaccata
gcgttgattgactggcacaatccggtgaataacagttttgtctttactgaagaattcagt
gtgactcgctctaatggtattgagtcgcgcaggccggatatcgtttgttttgtgaatggt
attccgctggcgattatcgaggccaaacgtccagatggtaatgccaaaaaaggcccaacc
cttgatgaaggaatttcgcaaagcctgcgtaatcagcggcacgatgaaattccgcgttta
ttcgcttacagccagctactgttatccattaatggtcatgatggccgttacggcacctgc
ggcacgccagcgaagttttgggcgaactggcgtgaagaggatatctcggatgctgagatg
tatgccatcaagaatcgctcactttccaccgaacaattcactgcgttgttcagccatcgt
tctcaagccattgtggattggtatcaacagttaataacgagcggtgaacttgccgttacc
gggcaagataagctgttaattagcctattgtcgccagttcgtctgttggagatgactcgc
tactttacgctgtttgataagaaagtgggaaaggttgttgcccgctatcagcaggtgttt
ggcatcaagcgtctgattgagcgtattaataccaaacgccctgatgggggcgtccaaggt
ggcgtgatttggcataccaccggttctggtaaatcattcacgatggtttttctgagcaag
gtactaattctgcatgaaaccctaaagcagtgccgcattgtggtggtgactgaccgtatt
gacctggaaaaacaactcagccgtacctttatttctggcggcgaattgtctgggaaacga
gataaagcatctgctatcgcgacctctggtacgcggctggcggagcagattggcaaaggg
actgaacgcattattttttcgctgattcagaagtttaataccgcgattcggctgccggga
tgcgttaataccagctcagatattatcgtcttgattgatgaaggccaccgtagccagggc
ggtgaaaaccatatccgcatgaagcaggcattgcctaatgccgcgtttgtcgcttttacc
ggcaccccgctgctaaaagacgataaaaccaccaataagtttggcccgattgtgcatgcc
tacaccatgcagcgggcagtggaagacaaaacggtaacgccgctgttatacgaagagcgt
attcctgaccttgatgttaatgaacgtgcgattgatagctggtttgaacgtattaccgaa
ggattaagcgacgaacaaaaaacagacctcaaacgtaagtttgccagaaaagggcaaata
tacagcacagacgatcgcatccgtcttatcgcattggatattgctaaccacttcgacaag
aatattgatgatggcttaaaaggccagctcgcctgtgacagtaaggtctctgcgattaag
tataaaaaatatcttgatgaagcaggcttatttgaatcagcggtggttattagctcgccc
gatacccgtgagggtaatactgagatcgatgaatccaccatgccggaagtggcgcagtgg
tggaaagagaatgttggctcgcaggatgaacaggtttatacccagcatattatcgagcgt
tttgataaagatgattcgctcaaaatcctgattgtggtcgataagctgctgacaggcttt
gacgagccgaaaaacgccgtgctctatatcgacaagccgcttaaaggacacaacctgatc
caggcgattgctcgtgttaaccgtttacatccgaaaaagaaatttggattgttgatcgat
tatcgcggcattctccgcgaactggataccaccattcaggactaccaaaagctcgcttcc
cgtacccaaggcggttacgacatcaacgatcttgttggtctctacggccagatgagcacg
gagtacaaacgtctccctcagctttataaaaatctgtgggcaatttttgctggtgtgaaa
aataagaatgacacccagcaactgcgccaggtgctaataccacgtattgaagagcgaaac
ggcgaacttgtcgatattcatctgagggtgcgtgaagacttctacgaagcgctgacggcg
tttgccagttgcctgaaagtagcattgcaatctgctacgttctttgaagataagagcttc
agtgatgatgatcgttatcactataaagaaacggtgagtcagttctctagcttacgccag
ttagttcagcaggatgcgggcgagcgtatcgactacgatgagtacgctgctcaggtgaaa
aaactgctggataaacacgtggtgggtgttgaggtccgagagcccgatggcgtatatgaa
gtgagccagatggggcagttccagcaacccgaagactggagcgatgagaaaactcgcaac
gaaacagacatcatcaaaacacgcgtcacgcggatgattgaacagcaactgcgtgacgac
ccttacgcacaggaggctttttctaagctattgcgtcaggcgattgaagaagcggagaag
ttatttgatcatccgttgaagcaatacctgctgtttcgtgagtttgaagagcaagtacaa
gaacgtcggctgaatgatatccctgatgcatttgccggtaatcaacatgctcaagcttat
tttggtgtattcagaaaaattctgccggaggtttttgcgattgttgatgcacaggtacag
gacaaatgggtaaaactggcatttactctcgatcagcttgtcgacgtttcggtagcggaa
aactcgattaatccacaaaacattgaagcggatatccgtaagaaactgctacctatgctg
tttaaagaatgcaaggcgattggcggtggtatggatcaagcaaaaaagatggtggagatg
atcgtacaaatcacccgagtcgggttgagtggggtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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