KEGG   Dickeya aquatica: DAQ1742_00725
Entry
DAQ1742_00725     CDS       T06021                                 
Symbol
holD
Name
(GenBank) DNA polymerase III psi subunit
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
daq  Dickeya aquatica
Pathway
daq03030  DNA replication
daq03430  Mismatch repair
daq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:daq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DAQ1742_00725 (holD)
   03430 Mismatch repair
    DAQ1742_00725 (holD)
   03440 Homologous recombination
    DAQ1742_00725 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:daq03032]
    DAQ1742_00725 (holD)
   03400 DNA repair and recombination proteins [BR:daq03400]
    DAQ1742_00725 (holD)
Enzymes [BR:daq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DAQ1742_00725 (holD)
DNA replication proteins [BR:daq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DAQ1742_00725 (holD)
DNA repair and recombination proteins [BR:daq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DAQ1742_00725 (holD)
SSDB
Motif
Pfam: DNA_III_psi CSTF_C
Other DBs
NCBI-ProteinID: SLM61801
UniProt: A0A375A752
Position
complement(724828..725262)
AA seq 144 aa
MTSRRDRLLEQLGITQWNLRRPSVLKGEIAISLPPAAQLLIISDPLPANDDPLVQDVVRS
LCLNHTQVVSLTPRQVEMLPEHTRCHCWWLGLPATEQWHGVHLTSPALTELYHDAGAKRA
LWQQICHHEQAFHADHNALNTDPT
NT seq 435 nt   +upstreamnt  +downstreamnt
atgacatcaagacgagacaggctgctggagcaactggggataacgcaatggaatttgcgc
cgtccatcagtgctcaaaggcgagatagccatcagcctgccacctgccgcacagttactg
ataatcagcgacccgctgccggccaacgatgatccgctggtgcaagacgtggtgcgcagc
ctgtgccttaaccatacgcaagtcgtcagcctgaccccgcgccaggtggaaatgctgcct
gaacacacccgctgccactgttggtggctgggcctgcccgccactgaacagtggcatggc
gtacacctgaccagcccggctctgaccgagctttaccatgatgccggggcgaaacgcgcc
ctgtggcaacagatctgtcaccatgaacaagccttccatgccgaccacaacgctctcaat
actgacccaacctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system