KEGG   Pseudodesulfovibrio aespoeensis: Daes_2990
Entry
Daes_2990         CDS       T01382                                 
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
das  Pseudodesulfovibrio aespoeensis
Brite
KEGG Orthology (KO) [BR:das00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:das03009]
    Daes_2990
Enzymes [BR:das01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     Daes_2990
Ribosome biogenesis [BR:das03009]
 Prokaryotic type
  ribosomal protein modification factors
   Daes_2990
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 TRAM
Other DBs
NCBI-ProteinID: ADU63984
UniProt: E6VZB2
Position
3230356..3231687
AA seq 443 aa
MAHHSVPAVKVFTVSLGCPKNLVDTERLLGALGPAMLPADTVAQADLALINTCGFIQPAV
EESVAAILDAVRDADETRESTGRRPLVAVAGCLVSRYGQDLREELPEVDLWLSTDQLHLW
PVMIAQAITHARPIPNAPRRLSTGPAYAYLKISEGCSHNCHFCTIPSIRGPHRSRPVEAL
LDEARTLAASVPEIIIVGQDSTSYGSDLGGDNTIKHLVSGLADLPGLAWLRLMYLYPAGL
TDDLLGFLKSIGDPLLPYFDIPLQHAHPDVLASMGRPFARNPRKVIDRVRAHFSDAALRT
TFIVGYPGETDEHFDHLMRFVEETRFHHLGVFPYWPEDGTPAAALPDPVDDQTKLDRRDA
LMALQADISREIMESHVGQTLPVLIEAPSPEWPGLFTGRTWFQAPEVDGTTYVSTPPDTT
LTPGTIVTIEIDKADTYDLSGLV
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggcgcaccattctgtccctgctgtcaaggtgttcacggtcagcctcggctgccccaaa
aacctcgtggacaccgagcggctgctcggcgcgctcggcccggccatgctcccggcggac
accgttgcccaagccgacctggccctgatcaacacctgcggcttcatccagcctgcggtc
gaggaatccgtggccgccatcctcgacgctgtgcgcgatgccgacgaaacccgcgaaagc
accggcagacgcccgctggtggccgtggccggctgccttgtcagccgctatgggcaggac
ctgcgcgaggagctgcccgaagtcgatctctggctctccaccgaccagctccacctctgg
cccgtcatgatcgcccaggccatcacccacgcccgccccatcccgaacgcgccccgccga
ctctccaccggcccggcctacgcctatctcaagatcagcgaagggtgctcccacaactgc
cacttctgcaccatcccctccatccgcggtccgcacagaagccgcccggtggaagccctc
ctggacgaggcgcgcaccctggccgccagcgtccctgaaataatcatcgtcggccaggac
tcgacctcctacggctcggacctcggcggcgacaacaccatcaagcatctcgtctccggc
ctggccgacctccccggcctcgcctggctcaggctcatgtatctctaccccgccgggctt
accgacgacctgctgggcttcctcaaatccatcggcgaccccctgctgccctacttcgac
atcccgctccagcacgcccaccccgacgtgctcgcctccatgggccgcccctttgcccgc
aacccgcgcaaggtcatcgaccgcgtgcgcgcccacttctccgatgccgccctgcgcacc
accttcatcgtcggctatcccggcgaaaccgacgaacacttcgaccacctgatgcgcttt
gtcgaggaaacccgcttccaccacctcggcgtcttcccttactggcccgaggacggcacc
cccgccgccgccctgcccgatccggtggacgaccagaccaaactcgaccgccgcgacgcc
ctcatggccctccaggccgacatcagccgcgagatcatggaatcccacgtcggccagacc
ctgcccgtgctcatcgaagcgccctccccggaatggcccgggctcttcacgggccgcacc
tggttccaggccccggaagtggacggcaccacctacgtcagcacgccgcccgacaccacc
ctcaccccaggaaccatcgtcaccatcgaaatcgacaaggccgacacctacgacctctcg
gggctcgtctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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