KEGG   Pseudodesulfovibrio aespoeensis: Daes_3320
Entry
Daes_3320         CDS       T01382                                 
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
das  Pseudodesulfovibrio aespoeensis
Pathway
das03030  DNA replication
das03430  Mismatch repair
das03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:das00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Daes_3320
   03430 Mismatch repair
    Daes_3320
   03440 Homologous recombination
    Daes_3320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:das03032]
    Daes_3320
   03400 DNA repair and recombination proteins [BR:das03400]
    Daes_3320
Enzymes [BR:das01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Daes_3320
DNA replication proteins [BR:das03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Daes_3320
DNA repair and recombination proteins [BR:das03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Daes_3320
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_3 DNA_pol3_beta_2 FtsH_ext
Other DBs
NCBI-ProteinID: ADU64308
UniProt: E6VSG5
Position
complement(3605681..3606850)
AA seq 389 aa
MFLKVNRDEIIEGLQKSANIIPAKTGAAFLRTIWLQCENGNLNIMSTDSNLEFMGSYPAS
IEEDGLAGVQGRAFYDLVKQLRNDQGELTLRTDEAKQNVLVEQKAKKYKFPVNDPEWFQK
FSSFPENGTVFWSGDFLHEIIDKIAFCISDEDSMEAIACIYFVPRESMGVKRVEVCGLNG
HQFAMFNFVNDDIYAMLPEEGVLIQKKYIGELKKWLTSDEIELAISHKRLFFRTGDQRET
FTLPLSYYQYPNYNNFLAKLGDDNVSTLEVKRLELVDALSRVALFNTDSNRCAYFTFGEG
EVTISAQGQETGTARESIDATFAGDMKRIAFPTRNLIEILNHFNSPTVKFTLTGTEAPCG
LTGVDDRDYNVIVMPMMIQEDTYYTEENV
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgtttctgaaagtgaacagggatgagatcatcgaaggcctccagaaatcggccaacatc
attccggccaaaacaggcgccgcctttttgcggaccatctggctgcagtgcgagaacggc
aacctgaacatcatgagcacggactcgaacctggaattcatgggctcgtatcccgcctcc
atcgaggaggacgggctggccggcgtgcagggccgcgccttttacgatctggtcaagcag
ctgcgcaatgaccagggcgagctgaccctgcgcaccgacgaggccaagcagaacgtgctg
gtggagcaaaaggccaagaaatacaaattcccggtcaatgatccggaatggttccagaaa
ttttccagcttcccggaaaacggcacggttttctggtccggcgatttcctccacgagatc
atcgacaagatcgccttttgcatctccgacgaggattccatggaggccattgcctgcatc
tacttcgtgccgcgcgagagcatgggcgtgaagcgggtcgaggtctgcggtctcaacggc
catcagttcgccatgttcaactttgtcaacgatgacatttatgccatgctcccggaagag
ggcgtgctcatccagaagaagtacatcggcgagctcaagaaatggctcacctccgacgag
atcgagctggccatcagccacaagcggctcttcttccgcaccggcgaccagcgggagacc
ttcaccctgccgctgtcctactaccagtatcccaactataacaatttcctggcaaagctc
ggcgatgacaatgtctcgaccctggaggtcaagcggttggagctggtggatgccctgtcg
cgcgtggccctgttcaacaccgattccaaccgctgcgcctacttcacctttggcgagggc
gaggtgaccatctcggcccagggtcaggagacgggcacggcacgcgaatccatcgacgcc
acctttgccggagacatgaagcgcatcgcgtttcccaccaggaatctcatcgagatcctg
aaccatttcaattcgcctaccgtcaagttcacgctgaccggtaccgaggccccctgcggc
ctgaccggtgtcgatgatcgcgattacaacgtgatcgtcatgcccatgatgatccaggaa
gatacttactacaccgaggaaaacgtctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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