KEGG   Desulforapulum autotrophicum: HRM2_04680
Entry
HRM2_04680        CDS       T00861                                 
Symbol
truB
Name
(GenBank) TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
dat  Desulforapulum autotrophicum
Brite
KEGG Orthology (KO) [BR:dat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dat03016]
    HRM2_04680 (truB)
Enzymes [BR:dat01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     HRM2_04680 (truB)
Transfer RNA biogenesis [BR:dat03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HRM2_04680 (truB)
 Prokaryotic type
    HRM2_04680 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: ACN13582
UniProt: C0QHM4
Position
536203..537111
AA seq 302 aa
MNSGILAVDKPGGISSARLVSRVKRCLNVKKAGHTGTLDPFATGLMLCGINSGTRISRFL
LGGPKRYTATLCLGVETDTLDCTGVKEQPANPTTVAAITPDQIIRVVNTFVGVQMQQPPV
YSALKHEGQPLYRLARQGRPVQKPLRQIEIFSASVEAIDLPHVTIKVHSSTGTYIRSLAR
DIGSALGCGAHLVELRRTESCGFSVDNAVPLSDLEAMDKDEPLSRIVPMHEVLSFMPSFA
ADMQMVKRVGFGQDIGLEKLMAPPEDPRSLFVQILDPHGALAAVVEYDPTLDKYNYCCVF
NR
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaacagcggaattcttgccgttgacaagcctggggggatatcctcggccaggttggtt
tcacgggtaaagcggtgcttgaatgtaaaaaaagccggtcataccggaaccctggatccc
tttgcgacaggcttgatgctgtgcggaatcaacagcgggacaaggatttccagatttttg
cttggtggtccaaaacgatataccgccactctctgcctgggggttgagacagataccctt
gattgcactggggttaaggaacaaccggccaaccccactactgtcgctgccattaccccc
gatcaaatcatcagggtggtcaatacctttgtgggtgtccagatgcagcaacctcccgtg
tattcagcccttaagcatgaaggacagcccctttaccgattggcgcgccagggcaggcct
gtgcaaaagcccttgaggcagatagagattttttccgcctccgttgaagcaattgatctt
ccccatgtgaccattaaggttcactcttccactggaacctatatcagaagccttgcccgg
gatatcggatccgcccttggctgcggtgcccacctggttgagcttagaagaaccgaatcc
tgcggattctccgtggacaatgccgttcccctgtccgatttggaagccatggacaaggat
gagccattgtcacgtatcgttcccatgcacgaggtcctctcgttcatgccctcttttgca
gcagatatgcagatggtcaaaagagtggggtttggccaggatatcggtcttgaaaaattg
atggctccccccgaggacccccgatcgttgtttgtccaaatccttgatccccatggtgcc
cttgcagccgtggtcgagtatgaccccacccttgataaatataattattgttgcgttttt
aaccgttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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