KEGG   Desulforapulum autotrophicum: HRM2_37670
Entry
HRM2_37670        CDS       T00861                                 
Symbol
rnd
Name
(GenBank) Rnd
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
dat  Desulforapulum autotrophicum
Brite
KEGG Orthology (KO) [BR:dat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dat03016]
    HRM2_37670 (rnd)
Enzymes [BR:dat01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     HRM2_37670 (rnd)
Transfer RNA biogenesis [BR:dat03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    HRM2_37670 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC DNA_pol_A_exoN
Other DBs
NCBI-ProteinID: ACN16825
UniProt: C0QAP2
Position
4229392..4230525
AA seq 377 aa
MIEYTLIENDEDLAARCDLLKTEKRLAFDLEADSMHHFKEKVCLVQMADPNDSFVVDPLS
IDDLSVLKPVFEDPAITKVFHGSDFDIRSLDRDFDIHVNNLFDTEIACRFLGIQKRSLAA
LLEKHFDLTLDKRFQKTDWSRRPLSKEMIAYSVNDVAYLLELSDILKKRLEDEGRLAWAE
EEFELQTRVRHDNNGNEPLFLKFKGSGKMGRRSLAVLESLLQFRKTLAVEKDKPLFKIIS
SEAIAKMAANQPETLHSLKELRALSPRQMDMYGTQCVAAIVGALKTPEKELPVYPRKRLP
EMAPQVPERIRSLKEMRITASNKTRIEPGFLLNNTMITAIAIASPRTADELAQIDGMRNW
QLEALTDDILSTLRICA
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgattgaatatacactgatcgaaaatgacgaggaccttgcggcccgttgcgaccttctc
aaaacagaaaaacggctggcctttgatcttgaggcagactccatgcaccactttaaggaa
aaggtgtgcctggtccagatggctgaccccaatgactcgtttgtggttgaccccctgagc
attgatgatttgtccgtgctcaaacccgtgtttgaagatcccgccatcaccaaggtgttc
catggatcagactttgacatccgcagccttgacagggattttgacatccatgtaaacaac
ctgtttgacacggaaatcgcctgccgattcctcggcattcagaaaagaagccttgcagcc
ctgctcgagaaacactttgacctgaccctggacaaacggttccagaaaaccgactggtcc
agacgccccctgtcaaaggagatgatcgcctacagcgtcaatgatgtggcctatcttctg
gaactcagtgatatcctcaaaaaacgcctggaggatgagggcagacttgcctgggcagaa
gaagagtttgaacttcagacccgggtgcgccatgacaacaatggcaacgaacctctgttc
ctgaaattcaagggttcagggaagatgggaagacgctcccttgccgtgcttgaaagcctt
ctccagttcagaaagaccctggcagtggaaaaagacaaacccctgttcaaaatcatcagt
tccgaggccattgccaaaatggcggccaaccagcctgagacccttcacagcctcaaggaa
ctccgggccttgagccccagacagatggacatgtatggcacccaatgcgttgcagccatt
gttggggcactcaaaacacctgaaaaagagcttcctgtttacccgagaaaacgacttccg
gaaatggccccccaggtccccgaacgaataagatccctcaaggagatgagaatcacggcc
agcaacaagacccggatcgaacccggcttcctcctcaacaacaccatgattacggccatt
gctattgcatcacccaggactgccgacgaactcgcacagatcgacggcatgagaaactgg
cagttagaggccctgaccgatgatattttatccaccctcaggatctgtgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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